Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs1102396	0.97[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11076316	0.82[ASN][1000 genomes]
rs12599241	0.83[ASN][1000 genomes]
rs1582316	0.86[ASN][1000 genomes]
rs1582318	0.86[ASN][1000 genomes]
rs1582326	0.84[ASN][1000 genomes]
rs1592481	0.86[ASN][1000 genomes]
rs1592483	0.82[ASN][1000 genomes]
rs1592484	0.82[ASN][1000 genomes]
rs1592487	0.84[ASN][1000 genomes]
rs1600002	0.86[ASN][1000 genomes]
rs1600003	0.86[ASN][1000 genomes]
rs1861323	0.84[ASN][1000 genomes]
rs2059233	0.86[ASN][1000 genomes]
rs2194291	1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2216741	0.82[ASN][1000 genomes]
rs256591	0.90[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs33362	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs33363	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs42771	0.92[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs72797914	0.97[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9652633	0.84[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv492248	chr16:51681902-52456082	Enhancers Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	40 gene(s)	inside rSNPs	diseases
2	esv34024	chr16:51878565-52316530	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
3	nsv827650	chr16:52067728-52124369	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:52088600-52089800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr16:52088800-52089600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr16:52088800-52089800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
4	chr16:52088800-52090600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
5	chr16:52088800-52090600	Enhancers	Fetal Lung	lung

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