The 2.0 version of rSNPBase

Variant report

Variant rs34044517
Chromosome Location chr6:11191434-11191435
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:11172800-11195000 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr6:11179000-11202200 Weak transcription Brain Substantia Nigra brain
3 chr6:11180200-11194600 Weak transcription iPS-15b Cell Line embryonic stem cell
4 chr6:11180600-11194400 Weak transcription iPS-18 Cell Line embryonic stem cell
5 chr6:11180800-11194800 Weak transcription ES-I3 Cell Line embryonic stem cell
6 chr6:11181600-11196200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
7 chr6:11182000-11194000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
8 chr6:11182400-11194000 Strong transcription NH-A brain
9 chr6:11182400-11195200 Strong transcription Primary T cells fromperipheralblood blood
10 chr6:11182600-11194800 Strong transcription Primary B cells from cord blood blood
11 chr6:11183000-11199000 Strong transcription Primary B cells from peripheral blood blood
12 chr6:11183200-11195000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr6:11183400-11191800 Strong transcription Fetal Thymus thymus
14 chr6:11183400-11194000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
15 chr6:11183400-11194000 Strong transcription Cortex derived primary cultured neurospheres brain
16 chr6:11183400-11194000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
17 chr6:11183400-11194000 Strong transcription Monocytes-CD14+_RO01746 blood
18 chr6:11183400-11194600 Strong transcription Primary T helper cells PMA-I stimulated --
19 chr6:11183400-11194600 Strong transcription Primary T helper cells fromperipheralblood blood
20 chr6:11183400-11195000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr6:11183600-11192400 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
22 chr6:11183600-11194200 Strong transcription HUES64 Cell Line embryonic stem cell
23 chr6:11183800-11194000 Strong transcription Duodenum Smooth Muscle Duodenum
24 chr6:11184000-11192200 Strong transcription Fetal Brain Female brain
25 chr6:11184000-11192400 Strong transcription Fetal Kidney kidney
26 chr6:11184000-11192600 Strong transcription Rectal Smooth Muscle rectum
27 chr6:11184000-11194000 Strong transcription Primary neutrophils fromperipheralblood blood
28 chr6:11184000-11194000 Strong transcription Primary T cells from cord blood blood
29 chr6:11184000-11194000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
30 chr6:11184000-11194000 Strong transcription Adipose Nuclei Adipose
31 chr6:11184000-11194000 Strong transcription Duodenum Mucosa Duodenum
32 chr6:11184000-11194000 Strong transcription Thymus Thymus
33 chr6:11184000-11194000 Strong transcription HUVEC blood vessel
34 chr6:11184000-11194200 Strong transcription Primary T helper 17 cells PMA-I stimulated --
35 chr6:11184000-11194600 Strong transcription Primary T regulatory cells fromperipheralblood blood
36 chr6:11184200-11193800 Strong transcription Fetal Adrenal Gland Adrenal Gland
37 chr6:11184200-11194000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
38 chr6:11184400-11192200 Strong transcription Fetal Muscle Leg muscle
39 chr6:11184400-11192400 Strong transcription GM12878-XiMat blood
40 chr6:11184400-11193000 Strong transcription Primary T helper naive cells fromperipheralblood blood
41 chr6:11184400-11195000 Strong transcription Breast Myoepithelial Primary Cells Breast
42 chr6:11184400-11197000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr6:11184600-11192400 Strong transcription Placenta Amnion Placenta Amnion
44 chr6:11184600-11194000 Strong transcription Fetal Stomach stomach
45 chr6:11184800-11191600 Strong transcription Primary hematopoietic stem cells short term culture blood
46 chr6:11184800-11191800 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
47 chr6:11184800-11192000 Strong transcription Skeletal Muscle Male skeletal muscle
48 chr6:11185400-11192200 Strong transcription Primary T helper naive cells from peripheral blood blood
49 chr6:11185800-11193800 Strong transcription Left Ventricle heart
50 chr6:11185800-11193800 Weak transcription Right Atrium heart

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Last update: Aug 31, 2015