The 2.0 version of rSNPBase

Variant report

Variant rs34071166
Chromosome Location chr1:214456669-214456670
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:214455200-214456800 Enhancers Spleen Spleen
2 chr1:214455200-214457000 Flanking Active TSS Dnd41 blood
3 chr1:214455400-214463200 Weak transcription Lung lung
4 chr1:214455600-214456800 Enhancers Primary monocytes fromperipheralblood blood
5 chr1:214455600-214456800 Enhancers Primary T cells fromperipheralblood blood
6 chr1:214455600-214487800 Weak transcription Primary B cells from cord blood blood
7 chr1:214455600-214489000 Weak transcription Ovary ovary
8 chr1:214455800-214456800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
9 chr1:214455800-214456800 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
10 chr1:214455800-214463200 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr1:214456000-214457000 Enhancers Primary T helper naive cells fromperipheralblood blood
12 chr1:214456000-214457200 Enhancers Primary hematopoietic stem cells short term culture blood
13 chr1:214456000-214457200 Enhancers Primary T regulatory cells fromperipheralblood blood
14 chr1:214456000-214458400 Weak transcription ES-WA7 Cell Line embryonic stem cell
15 chr1:214456000-214458400 Weak transcription Fetal Intestine Large intestine
16 chr1:214456000-214458800 Weak transcription Pancreatic Islets Pancreatic Islet
17 chr1:214456000-214469200 Weak transcription NH-A brain
18 chr1:214456200-214456800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr1:214456200-214456800 Enhancers Monocytes-CD14+_RO01746 blood
20 chr1:214456200-214457200 Enhancers Primary T killer naive cells fromperipheralblood blood
21 chr1:214456200-214457200 Enhancers Fetal Brain Female brain
22 chr1:214456200-214457400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
23 chr1:214456200-214457800 Enhancers Primary T helper cells fromperipheralblood blood
24 chr1:214456200-214458200 Weak transcription A549 lung
25 chr1:214456200-214458400 Weak transcription Duodenum Mucosa Duodenum
26 chr1:214456200-214459000 Weak transcription Gastric stomach
27 chr1:214456200-214459200 Enhancers Primary T helper cells PMA-I stimulated --
28 chr1:214456200-214462400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
29 chr1:214456200-214463000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr1:214456200-214463800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr1:214456200-214469800 Weak transcription Fetal Lung lung
32 chr1:214456400-214456800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr1:214456400-214456800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr1:214456400-214456800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
35 chr1:214456400-214456800 Active TSS GM12878-XiMat blood
36 chr1:214456400-214456800 Enhancers NHEK skin
37 chr1:214456400-214457200 Enhancers Hela-S3 cervix
38 chr1:214456400-214457400 Flanking Active TSS HepG2 liver
39 chr1:214456400-214458200 Weak transcription ES-I3 Cell Line embryonic stem cell
40 chr1:214456400-214458400 Weak transcription Fetal Intestine Small intestine
41 chr1:214456400-214458400 Weak transcription Skeletal Muscle Male skeletal muscle
42 chr1:214456400-214459400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
43 chr1:214456400-214463000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr1:214456400-214463000 Weak transcription Psoas Muscle Psoas
45 chr1:214456400-214463000 Weak transcription Right Atrium heart
46 chr1:214456400-214468800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
47 chr1:214456400-214470000 Weak transcription Placenta Amnion Placenta Amnion
48 chr1:214456400-214491800 Weak transcription Pancreas Pancrea
49 chr1:214456600-214456800 Active TSS HUES6 Cell Line embryonic stem cell
50 chr1:214456600-214456800 Enhancers Primary T cells from cord blood blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015