The 2.0 version of rSNPBase

Variant report

Variant rs34167705
Chromosome Location chr3:46585420-46585421
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:46544800-46599400 Weak transcription Right Atrium heart
2 chr3:46556400-46591000 Weak transcription Psoas Muscle Psoas
3 chr3:46558400-46591000 Weak transcription Gastric stomach
4 chr3:46567200-46586000 Weak transcription Breast Myoepithelial Primary Cells Breast
5 chr3:46571600-46587000 Weak transcription Brain Inferior Temporal Lobe brain
6 chr3:46578400-46599200 Weak transcription HSMMtube muscle
7 chr3:46578800-46586200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr3:46579200-46587800 Weak transcription ES-WA7 Cell Line embryonic stem cell
9 chr3:46579800-46586200 Weak transcription HUES48 Cell Line embryonic stem cell
10 chr3:46580200-46586200 Weak transcription Liver Liver
11 chr3:46580600-46586200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr3:46580800-46586400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr3:46581200-46599200 Weak transcription Fetal Heart heart
14 chr3:46581400-46594400 Enhancers Fetal Thymus thymus
15 chr3:46581600-46586000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr3:46581600-46591000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
17 chr3:46581600-46599400 Weak transcription Spleen Spleen
18 chr3:46581800-46587200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
19 chr3:46581800-46587600 Enhancers Dnd41 blood
20 chr3:46582400-46587200 Weak transcription Primary T killer naive cells fromperipheralblood blood
21 chr3:46583000-46588000 Strong transcription Ovary ovary
22 chr3:46583200-46590600 Weak transcription Primary hematopoietic stem cells blood
23 chr3:46583400-46587200 Weak transcription Primary T helper naive cells fromperipheralblood blood
24 chr3:46583600-46585600 Enhancers Hela-S3 cervix
25 chr3:46583800-46587200 Weak transcription Primary T killer memory cells from peripheral blood blood
26 chr3:46584000-46587400 Weak transcription Primary T helper cells PMA-I stimulated --
27 chr3:46584200-46587000 Weak transcription Primary T helper cells fromperipheralblood blood
28 chr3:46584400-46587200 Weak transcription Primary B cells from peripheral blood blood
29 chr3:46584400-46587400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
30 chr3:46584400-46598000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr3:46584600-46586400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr3:46584600-46586800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
33 chr3:46584600-46587200 Weak transcription GM12878-XiMat blood
34 chr3:46584600-46591000 Weak transcription Primary hematopoietic stem cells short term culture blood
35 chr3:46584600-46591200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr3:46584800-46586000 Weak transcription HUES6 Cell Line embryonic stem cell
37 chr3:46584800-46586000 Weak transcription Thymus Thymus
38 chr3:46584800-46586200 Weak transcription H1 Cell Line embryonic stem cell
39 chr3:46584800-46586400 Strong transcription Skeletal Muscle Female skeletal muscle
40 chr3:46584800-46586400 Weak transcription K562 blood
41 chr3:46584800-46586600 Weak transcription Primary T cells from cord blood blood
42 chr3:46584800-46587000 Strong transcription Skeletal Muscle Male skeletal muscle
43 chr3:46584800-46588400 Strong transcription Left Ventricle heart
44 chr3:46584800-46588600 Weak transcription Osteobl bone
45 chr3:46584800-46590400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr3:46584800-46590800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr3:46584800-46592600 Weak transcription Muscle Satellite Cultured Cells --
48 chr3:46584800-46594000 Weak transcription NHDF-Ad bronchial
49 chr3:46584800-46594400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr3:46585000-46588000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015