Variant report

Variant	rs34179831
Chromosome Location	chr3:134989260-134989261
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 33 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs10608	0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11923218	0.84[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13071859	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13072079	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13080641	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13080855	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13085606	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13093562	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13094179	0.86[EUR][1000 genomes]
rs13095925	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16842883	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17712024	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17712106	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17712383	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3182239	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34206167	0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34340628	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34344981	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34893823	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35092007	0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35326767	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35533080	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35653041	0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35805151	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35943770	0.83[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35944228	0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36067487	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs66525503	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs66645582	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67171651	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67224719	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs67358622	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73220299	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:134979800-134989600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr3:134980600-134990000	Weak transcription	Fetal Brain Female	brain
3	chr3:134984000-134989800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr3:134985000-134989800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
5	chr3:134985000-134990400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
6	chr3:134986800-134990400	Weak transcription	Psoas Muscle	Psoas
7	chr3:134987000-134990400	Weak transcription	Skeletal Muscle Male	skeletal muscle
8	chr3:134987600-134990200	Weak transcription	Skeletal Muscle Female	skeletal muscle
9	chr3:134988200-134989800	Weak transcription	Brain Germinal Matrix	brain
10	chr3:134988400-134989800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain

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