Variant report

Variant	rs342911
Chromosome Location	chr3:146339921-146339922
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs173144	0.83[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs342885	0.80[YRI][hapmap]
rs342905	0.87[ASN][1000 genomes]
rs342906	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs342907	0.99[ASN][1000 genomes]
rs342908	0.99[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs342910	0.93[ASN][1000 genomes]
rs342912	0.96[ASN][1000 genomes]
rs342937	0.87[ASN][1000 genomes]
rs342938	0.87[ASN][1000 genomes]
rs342940	0.95[CHB][hapmap]
rs342941	0.95[CHB][hapmap];0.81[JPT][hapmap]
rs343278	0.91[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:146338400-146340200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr3:146339800-146344000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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