The 2.0 version of rSNPBase

Variant report

Variant rs34324119
Chromosome Location chr19:19689633-19689634
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:19671600-19701800 Weak transcription Stomach Smooth Muscle stomach
2 chr19:19672000-19704800 Weak transcription Brain Angular Gyrus brain
3 chr19:19674200-19690600 Weak transcription Duodenum Mucosa Duodenum
4 chr19:19674200-19690800 Weak transcription Rectal Mucosa Donor 29 rectum
5 chr19:19674200-19691000 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr19:19674200-19699800 Weak transcription Primary T killer naive cells fromperipheralblood blood
7 chr19:19674400-19690600 Weak transcription Stomach Mucosa stomach
8 chr19:19676200-19701600 Weak transcription GM12878-XiMat blood
9 chr19:19678800-19693000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr19:19679800-19690600 Weak transcription NHEK skin
11 chr19:19680400-19690400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr19:19681200-19701600 Weak transcription NHLF lung
13 chr19:19681400-19690000 Weak transcription Lung lung
14 chr19:19681400-19690600 Weak transcription Primary T killer memory cells from peripheral blood blood
15 chr19:19681400-19690600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr19:19681400-19690600 Weak transcription Gastric stomach
17 chr19:19681400-19690800 Weak transcription Primary T helper naive cells from peripheral blood blood
18 chr19:19681400-19701600 Weak transcription Fetal Lung lung
19 chr19:19681600-19690800 Weak transcription Primary T cells from cord blood blood
20 chr19:19681600-19693000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
21 chr19:19681600-19701600 Weak transcription Esophagus oesophagus
22 chr19:19681600-19703200 Weak transcription Dnd41 blood
23 chr19:19681800-19690600 Weak transcription Primary T helper cells PMA-I stimulated --
24 chr19:19681800-19691000 Weak transcription Primary T cells fromperipheralblood blood
25 chr19:19681800-19692800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
26 chr19:19682000-19690400 Weak transcription Primary T helper naive cells fromperipheralblood blood
27 chr19:19682000-19690400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr19:19682000-19690600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr19:19682000-19692800 Weak transcription Primary T helper cells fromperipheralblood blood
30 chr19:19682000-19702200 Weak transcription Breast Myoepithelial Primary Cells Breast
31 chr19:19682200-19692000 Weak transcription Primary T regulatory cells fromperipheralblood blood
32 chr19:19682400-19692800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
33 chr19:19682600-19692800 Weak transcription Spleen Spleen
34 chr19:19682600-19700600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
35 chr19:19686600-19700600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
36 chr19:19686800-19690200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr19:19687000-19693000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
38 chr19:19687000-19701600 Weak transcription iPS-15b Cell Line embryonic stem cell
39 chr19:19688400-19691000 Enhancers Brain Germinal Matrix brain
40 chr19:19688400-19691000 Enhancers Fetal Muscle Trunk muscle
41 chr19:19688400-19692800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
42 chr19:19688400-19699000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
43 chr19:19688600-19691000 Enhancers Fetal Muscle Leg muscle
44 chr19:19688800-19689800 Strong transcription Thymus Thymus
45 chr19:19689000-19689800 Enhancers Cortex derived primary cultured neurospheres brain
46 chr19:19689000-19689800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
47 chr19:19689000-19689800 Enhancers Fetal Brain Female brain
48 chr19:19689200-19689800 Enhancers Fetal Brain Male brain
49 chr19:19689400-19692800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
50 chr19:19689400-19693000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived

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Last update: Aug 31, 2015