The 2.0 version of rSNPBase

Variant report

Variant rs62137783
Chromosome Location chr19:19690722-19690723
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:19671600-19701800 Weak transcription Stomach Smooth Muscle stomach
2 chr19:19672000-19704800 Weak transcription Brain Angular Gyrus brain
3 chr19:19674200-19690800 Weak transcription Rectal Mucosa Donor 29 rectum
4 chr19:19674200-19691000 Weak transcription Rectal Mucosa Donor 31 rectum
5 chr19:19674200-19699800 Weak transcription Primary T killer naive cells fromperipheralblood blood
6 chr19:19676200-19701600 Weak transcription GM12878-XiMat blood
7 chr19:19678800-19693000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr19:19681200-19701600 Weak transcription NHLF lung
9 chr19:19681400-19690800 Weak transcription Primary T helper naive cells from peripheral blood blood
10 chr19:19681400-19701600 Weak transcription Fetal Lung lung
11 chr19:19681600-19690800 Weak transcription Primary T cells from cord blood blood
12 chr19:19681600-19693000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
13 chr19:19681600-19701600 Weak transcription Esophagus oesophagus
14 chr19:19681600-19703200 Weak transcription Dnd41 blood
15 chr19:19681800-19691000 Weak transcription Primary T cells fromperipheralblood blood
16 chr19:19681800-19692800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
17 chr19:19682000-19692800 Weak transcription Primary T helper cells fromperipheralblood blood
18 chr19:19682000-19702200 Weak transcription Breast Myoepithelial Primary Cells Breast
19 chr19:19682200-19692000 Weak transcription Primary T regulatory cells fromperipheralblood blood
20 chr19:19682400-19692800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
21 chr19:19682600-19692800 Weak transcription Spleen Spleen
22 chr19:19682600-19700600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
23 chr19:19686600-19700600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
24 chr19:19687000-19693000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
25 chr19:19687000-19701600 Weak transcription iPS-15b Cell Line embryonic stem cell
26 chr19:19688400-19691000 Enhancers Brain Germinal Matrix brain
27 chr19:19688400-19691000 Enhancers Fetal Muscle Trunk muscle
28 chr19:19688400-19692800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
29 chr19:19688400-19699000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
30 chr19:19688600-19691000 Enhancers Fetal Muscle Leg muscle
31 chr19:19689400-19692800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
32 chr19:19689400-19693000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr19:19689600-19693000 Strong transcription Fetal Stomach stomach
34 chr19:19689800-19698800 Weak transcription Cortex derived primary cultured neurospheres brain
35 chr19:19689800-19700600 Weak transcription Thymus Thymus
36 chr19:19689800-19701800 Weak transcription Fetal Brain Female brain
37 chr19:19690200-19691200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
38 chr19:19690200-19694000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
39 chr19:19690400-19691000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr19:19690400-19691400 Enhancers Primary T helper naive cells fromperipheralblood blood
41 chr19:19690400-19691400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr19:19690600-19690800 Enhancers Brain Dorsolateral Prefrontal Cortex brain
43 chr19:19690600-19691000 Enhancers Gastric stomach
44 chr19:19690600-19691200 Enhancers NHEK skin
45 chr19:19690600-19691400 Enhancers Primary T helper cells PMA-I stimulated --
46 chr19:19690600-19691400 Enhancers Primary T killer memory cells from peripheral blood blood
47 chr19:19690600-19691400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr19:19690600-19691400 Enhancers Duodenum Mucosa Duodenum
49 chr19:19690600-19693400 Enhancers Stomach Mucosa stomach
50 chr19:19690600-19693800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin

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Last update: Aug 31, 2015