Variant report

Variant rs34352825
Chromosome Location chr2:55236448-55236449
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:55198200-55237200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr2:55203800-55258400 Weak transcription Esophagus oesophagus
3 chr2:55214800-55236800 Weak transcription Primary T cells fromperipheralblood blood
4 chr2:55220400-55236800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
5 chr2:55223000-55237200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr2:55224800-55236800 Enhancers A549 lung
7 chr2:55226600-55237200 Weak transcription H1 Cell Line embryonic stem cell
8 chr2:55226800-55236600 Weak transcription Right Atrium heart
9 chr2:55226800-55237000 Weak transcription Fetal Adrenal Gland Adrenal Gland
10 chr2:55227000-55236600 Weak transcription Brain Germinal Matrix brain
11 chr2:55227200-55236800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr2:55227400-55236800 Weak transcription Fetal Brain Male brain
13 chr2:55227400-55237000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr2:55227600-55236800 Weak transcription HSMMtube muscle
15 chr2:55227600-55239000 Weak transcription Hela-S3 cervix
16 chr2:55227800-55236800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
17 chr2:55227800-55236800 Weak transcription NH-A brain
18 chr2:55228000-55236600 Weak transcription Primary B cells from cord blood blood
19 chr2:55229000-55236800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
20 chr2:55229600-55237200 Weak transcription Pancreas Pancrea
21 chr2:55230000-55236600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
22 chr2:55230800-55237000 Weak transcription HUVEC blood vessel
23 chr2:55231000-55237400 Active TSS Skeletal Muscle Male skeletal muscle
24 chr2:55231000-55238200 Active TSS Skeletal Muscle Female skeletal muscle
25 chr2:55231600-55236600 Enhancers Primary T helper cells PMA-I stimulated --
26 chr2:55231600-55236800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
27 chr2:55232000-55236600 Enhancers Primary T helper naive cells from peripheral blood blood
28 chr2:55232000-55236800 Enhancers Primary T helper cells fromperipheralblood blood
29 chr2:55232200-55236600 Enhancers Muscle Satellite Cultured Cells --
30 chr2:55232200-55237200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
31 chr2:55232200-55244800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
32 chr2:55232400-55236800 Weak transcription Placenta Placenta
33 chr2:55232400-55237200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
34 chr2:55232800-55236800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
35 chr2:55233200-55236600 Enhancers Primary T helper naive cells fromperipheralblood blood
36 chr2:55233200-55236600 Enhancers Primary T killer naive cells fromperipheralblood blood
37 chr2:55233200-55237600 Active TSS Pancreatic Islets Pancreatic Islet
38 chr2:55233200-55240400 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr2:55233600-55236600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr2:55233600-55237000 Weak transcription Fetal Brain Female brain
41 chr2:55233600-55237400 Active TSS Fetal Muscle Leg muscle
42 chr2:55233800-55236800 Enhancers NHEK skin
43 chr2:55233800-55237800 Active TSS Brain Dorsolateral Prefrontal Cortex brain
44 chr2:55234000-55236600 Weak transcription Colonic Mucosa Colon
45 chr2:55234200-55236600 Active TSS Brain Inferior Temporal Lobe brain
46 chr2:55234200-55236800 Weak transcription HepG2 liver
47 chr2:55234200-55236800 Enhancers Osteobl bone
48 chr2:55234600-55236600 Enhancers Duodenum Smooth Muscle Duodenum
49 chr2:55234600-55236600 Weak transcription Fetal Thymus thymus
50 chr2:55234600-55236800 Weak transcription HUES6 Cell Line embryonic stem cell

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