Variant report

Variant	rs34466320
Chromosome Location	chr3:51539688-51539689
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs12488178	1.00[LWK][hapmap]
rs34232618	1.00[AMR][1000 genomes]
rs35307667	1.00[AMR][1000 genomes]
rs35374784	1.00[LWK][hapmap]
rs35504866	1.00[AMR][1000 genomes]
rs36030849	1.00[AMR][1000 genomes]
rs71329050	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1014464	chr3:51220151-51909780	Weak transcription Strong transcription Flanking Active TSS Genic enhancers Enhancers ZNF genes & repeats Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	53 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:51535000-51541400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr3:51536200-51540200	Weak transcription	Stomach Smooth Muscle	stomach
3	chr3:51536400-51543200	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
4	chr3:51537000-51543800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
5	chr3:51538000-51543400	Weak transcription	Placenta	Placenta

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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