Variant report
| Variant | rs34551446 |
|---|---|
| Chromosome Location | chr5:178386488-178386489 |
| allele | A/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:178369400-178418200 | ZNF genes & repeats | Fetal Brain Female | brain |
| 2 | chr5:178379000-178387400 | ZNF genes & repeats | Ovary | ovary |
| 3 | chr5:178380000-178393600 | ZNF genes & repeats | Breast Myoepithelial Primary Cells | Breast |
| 4 | chr5:178381400-178394200 | ZNF genes & repeats | Cortex derived primary cultured neurospheres | brain |
| 5 | chr5:178381600-178386600 | ZNF genes & repeats | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 6 | chr5:178382400-178389400 | Weak transcription | HSMM | muscle |
| 7 | chr5:178382600-178389800 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 8 | chr5:178383000-178389800 | Weak transcription | Pancreas | Pancrea |
| 9 | chr5:178383400-178394400 | ZNF genes & repeats | Ganglion Eminence derived primary cultured neurospheres | brain |
| 10 | chr5:178384200-178388000 | ZNF genes & repeats | Brain Germinal Matrix | brain |
| 11 | chr5:178384400-178395600 | ZNF genes & repeats | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 12 | chr5:178384600-178386600 | ZNF genes & repeats | Brain Hippocampus Middle | brain |
| 13 | chr5:178384600-178386600 | ZNF genes & repeats | Brain Dorsolateral Prefrontal Cortex | brain |
| 14 | chr5:178384600-178387200 | ZNF genes & repeats | Fetal Lung | lung |
| 15 | chr5:178384600-178387600 | ZNF genes & repeats | Duodenum Smooth Muscle | Duodenum |
| 16 | chr5:178384600-178388000 | ZNF genes & repeats | Adipose Nuclei | Adipose |
| 17 | chr5:178384800-178386600 | Weak transcription | Fetal Stomach | stomach |
| 18 | chr5:178384800-178388600 | Weak transcription | Gastric | stomach |
| 19 | chr5:178385200-178386600 | ZNF genes & repeats | Brain Angular Gyrus | brain |
| 20 | chr5:178385200-178387600 | ZNF genes & repeats | Pancreatic Islets | Pancreatic Islet |
| 21 | chr5:178385200-178388000 | ZNF genes & repeats | Liver | Liver |
| 22 | chr5:178385400-178387400 | ZNF genes & repeats | Brain Substantia Nigra | brain |
| 23 | chr5:178385600-178388600 | ZNF genes & repeats | ES-UCSF4 Cell Line | embryonic stem cell |
| 24 | chr5:178386200-178387600 | ZNF genes & repeats | Aorta | Aorta |
| 25 | chr5:178386200-178388200 | ZNF genes & repeats | Left Ventricle | heart |
| 26 | chr5:178386400-178386600 | Weak transcription | Fetal Heart | heart |
| 27 | chr5:178386400-178387000 | Weak transcription | Stomach Smooth Muscle | stomach |
| 28 | chr5:178386400-178388600 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 29 | chr5:178386400-178388600 | ZNF genes & repeats | Fetal Adrenal Gland | Adrenal Gland |
| 30 | chr5:178386400-178388800 | Weak transcription | Fetal Kidney | kidney |
| 31 | chr5:178386400-178389600 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 32 | chr5:178386400-178389800 | Weak transcription | Right Ventricle | heart |
