The 2.0 version of rSNPBase

Variant report

Variant rs34590851
Chromosome Location chr5:75746753-75746754
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:75703600-75747000 Weak transcription Rectal Mucosa Donor 29 rectum
2 chr5:75722800-75767800 Weak transcription Ovary ovary
3 chr5:75724200-75748400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr5:75729400-75751600 Weak transcription iPS-20b Cell Line embryonic stem cell
5 chr5:75736400-75747000 Weak transcription GM12878-XiMat blood
6 chr5:75737800-75747000 Weak transcription Gastric stomach
7 chr5:75737800-75751400 Weak transcription H9 Cell Line embryonic stem cell
8 chr5:75738400-75749200 Weak transcription ES-I3 Cell Line embryonic stem cell
9 chr5:75741000-75747000 Weak transcription Spleen Spleen
10 chr5:75742000-75757600 Weak transcription Lung lung
11 chr5:75742400-75753000 Weak transcription Fetal Intestine Small intestine
12 chr5:75742600-75753800 Weak transcription Colonic Mucosa Colon
13 chr5:75743000-75747600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
14 chr5:75743000-75748400 Weak transcription HUES64 Cell Line embryonic stem cell
15 chr5:75743000-75751400 Weak transcription HUES6 Cell Line embryonic stem cell
16 chr5:75743000-75751800 Weak transcription iPS-15b Cell Line embryonic stem cell
17 chr5:75743200-75747400 Enhancers Primary T helper cells fromperipheralblood blood
18 chr5:75743400-75748400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
19 chr5:75743600-75747600 Enhancers Primary T killer memory cells from peripheral blood blood
20 chr5:75743800-75747600 Enhancers Primary T killer naive cells fromperipheralblood blood
21 chr5:75743800-75753400 Weak transcription Fetal Adrenal Gland Adrenal Gland
22 chr5:75744000-75747600 Enhancers Primary T helper naive cells fromperipheralblood blood
23 chr5:75744600-75747000 Enhancers Primary T helper 17 cells PMA-I stimulated --
24 chr5:75744800-75748600 Enhancers Duodenum Mucosa Duodenum
25 chr5:75745000-75746800 Enhancers Colon Smooth Muscle Colon
26 chr5:75745000-75747000 Weak transcription Placenta Placenta
27 chr5:75745000-75747200 Enhancers Primary T helper naive cells from peripheral blood blood
28 chr5:75745000-75747400 Enhancers Primary hematopoietic stem cells blood
29 chr5:75745000-75747400 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
30 chr5:75745000-75747600 Enhancers Stomach Mucosa stomach
31 chr5:75745000-75749200 Enhancers Primary monocytes fromperipheralblood blood
32 chr5:75745000-75751400 Weak transcription Liver Liver
33 chr5:75745000-75767800 Weak transcription Fetal Thymus thymus
34 chr5:75745200-75747200 Enhancers Brain Germinal Matrix brain
35 chr5:75745200-75747200 Enhancers Fetal Stomach stomach
36 chr5:75745200-75753400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr5:75745400-75747600 Enhancers Primary T cells from cord blood blood
38 chr5:75745400-75747800 Enhancers Primary hematopoietic stem cells short term culture blood
39 chr5:75745400-75748000 Enhancers Primary T regulatory cells fromperipheralblood blood
40 chr5:75745600-75746800 Weak transcription Small Intestine intestine
41 chr5:75745600-75747200 Enhancers Fetal Lung lung
42 chr5:75745600-75747800 Enhancers Primary T helper cells PMA-I stimulated --
43 chr5:75745600-75749200 Enhancers Monocytes-CD14+_RO01746 blood
44 chr5:75745600-75752800 Weak transcription Primary B cells from cord blood blood
45 chr5:75745800-75747400 Enhancers Primary neutrophils fromperipheralblood blood
46 chr5:75745800-75749600 Weak transcription Thymus Thymus
47 chr5:75746000-75747600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr5:75746200-75747000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
49 chr5:75746200-75747000 Weak transcription Primary T cells fromperipheralblood blood
50 chr5:75746200-75747000 Weak transcription Cortex derived primary cultured neurospheres brain

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Last update: Aug 31, 2015