Variant report

Variant	rs34597764
Chromosome Location	chr10:97262994-97262995
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:97262883..97265174-chr10:97289179..97291481,2	K562	blood:
2	chr10:97234291..97235881-chr10:97262986..97265815,2	K562	blood:

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs12240292	0.88[AFR][1000 genomes]
rs12244553	0.88[AFR][1000 genomes]
rs12247017	0.88[AFR][1000 genomes]
rs12254671	0.88[AFR][1000 genomes]
rs12776555	0.84[AFR][1000 genomes]
rs28419260	0.84[AFR][1000 genomes]
rs34717677	0.81[EUR][1000 genomes]
rs35793106	0.84[AFR][1000 genomes]
rs4918944	0.84[AFR][1000 genomes]
rs7905724	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3407691	chr10:97262714-97263179	Enhancers Weak transcription Genic enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:72 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:97245400-97264600	Weak transcription	Ovary	ovary
2	chr10:97249800-97274000	Weak transcription	Spleen	Spleen
3	chr10:97251200-97268200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr10:97254000-97265000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
5	chr10:97256800-97273200	Weak transcription	HSMM	muscle
6	chr10:97257400-97264800	Weak transcription	Placenta	Placenta
7	chr10:97257600-97268000	Weak transcription	HSMMtube	muscle
8	chr10:97258200-97264600	Enhancers	Breast Myoepithelial Primary Cells	Breast
9	chr10:97259200-97263000	Enhancers	HUES6 Cell Line	embryonic stem cell
10	chr10:97259200-97267200	Enhancers	Liver	Liver
11	chr10:97259400-97266400	Enhancers	Brain Angular Gyrus	brain
12	chr10:97259400-97269600	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
13	chr10:97259600-97265400	Enhancers	Brain Cingulate Gyrus	brain
14	chr10:97259600-97265400	Enhancers	Brain Hippocampus Middle	brain
15	chr10:97259800-97264200	Enhancers	Psoas Muscle	Psoas
16	chr10:97260000-97263600	Enhancers	Fetal Muscle Leg	muscle
17	chr10:97260000-97265400	Enhancers	Skeletal Muscle Female	skeletal muscle
18	chr10:97260000-97269000	Enhancers	Left Ventricle	heart
19	chr10:97260000-97272800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
20	chr10:97260000-97278400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
21	chr10:97260200-97264600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
22	chr10:97260200-97264600	Weak transcription	HUVEC	blood vessel
23	chr10:97260400-97268200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
24	chr10:97260600-97263800	Enhancers	K562	blood
25	chr10:97260600-97265000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
26	chr10:97260600-97265400	Enhancers	Brain Inferior Temporal Lobe	brain
27	chr10:97260600-97266200	Enhancers	Right Atrium	heart
28	chr10:97260800-97268000	Weak transcription	Rectal Mucosa Donor 31	rectum
29	chr10:97260800-97269400	Enhancers	Skeletal Muscle Male	skeletal muscle
30	chr10:97260800-97272800	Weak transcription	Esophagus	oesophagus
31	chr10:97261000-97263000	Enhancers	Fetal Brain Male	brain
32	chr10:97261000-97264400	Enhancers	Fetal Intestine Large	intestine
33	chr10:97261000-97266600	Enhancers	Stomach Mucosa	stomach
34	chr10:97261000-97268000	Enhancers	Fetal Heart	heart
35	chr10:97261200-97263000	Enhancers	Fetal Brain Female	brain
36	chr10:97261200-97264600	Enhancers	Brain Substantia Nigra	brain
37	chr10:97261200-97268000	Enhancers	Rectal Smooth Muscle	rectum
38	chr10:97261200-97268600	Enhancers	Colon Smooth Muscle	Colon
39	chr10:97261400-97264000	Enhancers	Fetal Intestine Small	intestine
40	chr10:97261400-97264600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
41	chr10:97261400-97264600	Enhancers	Right Ventricle	heart
42	chr10:97261400-97265000	Enhancers	Aorta	Aorta
43	chr10:97261600-97263800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
44	chr10:97261600-97265200	Enhancers	Gastric	stomach
45	chr10:97261800-97263800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
46	chr10:97261800-97265000	Weak transcription	H1 Cell Line	embryonic stem cell
47	chr10:97261800-97266200	Enhancers	Brain Anterior Caudate	brain
48	chr10:97261800-97268400	Weak transcription	H9 Cell Line	embryonic stem cell
49	chr10:97261800-97271200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
50	chr10:97262000-97263000	Enhancers	Fetal Lung	lung

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