Variant report

Variant	rs34644391
Chromosome Location	chr14:69838784-69838785
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:69821172..69826934-chr14:69835934..69842143,9	MCF-7	breast:
2	chr14:69827353..69829184-chr14:69836864..69838973,2	MCF-7	breast:
3	chr14:69837785..69841681-chr14:69853378..69856330,3	MCF-7	breast:
4	chr14:69837007..69840981-chr14:69846953..69850536,4	K562	blood:

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs12879905	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12884741	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12890434	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs17106981	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17107007	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs34112413	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34531959	0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs34765661	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35876363	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs71423358	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71423359	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:89 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69815600-69838800	Weak transcription	Brain Germinal Matrix	brain
2	chr14:69818600-69842800	Weak transcription	H9 Cell Line	embryonic stem cell
3	chr14:69821000-69838800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr14:69821000-69839600	Weak transcription	Fetal Brain Female	brain
5	chr14:69821800-69852400	Weak transcription	Spleen	Spleen
6	chr14:69824200-69864000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr14:69827600-69838800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr14:69828000-69838800	Weak transcription	Primary B cells from cord blood	blood
9	chr14:69828000-69838800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chr14:69828000-69843000	Weak transcription	GM12878-XiMat	blood
11	chr14:69830000-69847200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
12	chr14:69830200-69842400	Weak transcription	NHDF-Ad	bronchial
13	chr14:69830200-69843000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
14	chr14:69830600-69841400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
15	chr14:69831200-69838800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
16	chr14:69831200-69841600	Weak transcription	Brain Anterior Caudate	brain
17	chr14:69831200-69842200	Weak transcription	Brain Hippocampus Middle	brain
18	chr14:69831200-69842800	Weak transcription	Brain Inferior Temporal Lobe	brain
19	chr14:69831200-69852400	Weak transcription	Brain Substantia Nigra	brain
20	chr14:69831400-69841200	Weak transcription	Cortex derived primary cultured neurospheres	brain
21	chr14:69831400-69843200	Weak transcription	Brain Cingulate Gyrus	brain
22	chr14:69831600-69841200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
23	chr14:69831600-69843000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
24	chr14:69831800-69841600	Weak transcription	Stomach Smooth Muscle	stomach
25	chr14:69832000-69842400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
26	chr14:69832400-69839400	Weak transcription	A549	lung
27	chr14:69832400-69842400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
28	chr14:69832800-69838800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
29	chr14:69832800-69841200	Weak transcription	Dnd41	blood
30	chr14:69833000-69841000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
31	chr14:69833200-69839600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
32	chr14:69833200-69845600	Weak transcription	Fetal Stomach	stomach
33	chr14:69833400-69842200	Weak transcription	Fetal Intestine Large	intestine
34	chr14:69833600-69841200	Weak transcription	Primary T cells from cord blood	blood
35	chr14:69833800-69839000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
36	chr14:69834000-69841400	Weak transcription	HSMM	muscle
37	chr14:69834000-69841800	Weak transcription	Duodenum Mucosa	Duodenum
38	chr14:69834200-69838800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
39	chr14:69834200-69842800	Weak transcription	Lung	lung
40	chr14:69834800-69838800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
41	chr14:69835200-69841400	Weak transcription	Fetal Muscle Trunk	muscle
42	chr14:69835200-69841600	Weak transcription	Fetal Muscle Leg	muscle
43	chr14:69835400-69841600	Weak transcription	Skeletal Muscle Male	skeletal muscle
44	chr14:69835400-69851800	Weak transcription	Psoas Muscle	Psoas
45	chr14:69835600-69841000	Weak transcription	Skeletal Muscle Female	skeletal muscle
46	chr14:69835600-69841600	Weak transcription	Primary hematopoietic stem cells	blood
47	chr14:69835600-69851600	Weak transcription	Pancreas	Pancrea
48	chr14:69835800-69843400	Weak transcription	Brain Angular Gyrus	brain
49	chr14:69835800-69852400	Weak transcription	Small Intestine	intestine
50	chr14:69836400-69841600	Weak transcription	Adipose Nuclei	Adipose

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