Variant report

Variant	rs71423358
Chromosome Location	chr14:69862376-69862377
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr14:69861814-69862809	K562	blood:	n/a	n/a

Variant related genes	Relation type
SLC39A9	TF binding region
ERH	TF binding region

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs12879905	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12884741	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12890434	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs17106981	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17107007	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs34112413	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34531959	0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs34644391	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34765661	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35876363	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs71423359	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69824200-69864000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr14:69841000-69863400	Strong transcription	A549	lung
3	chr14:69841200-69863000	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
4	chr14:69841400-69862800	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
5	chr14:69841600-69863400	Strong transcription	HUES6 Cell Line	embryonic stem cell
6	chr14:69841800-69863000	Strong transcription	HUES64 Cell Line	embryonic stem cell
7	chr14:69841800-69863800	Weak transcription	Stomach Mucosa	stomach
8	chr14:69842600-69863200	Strong transcription	iPS-20b Cell Line	embryonic stem cell
9	chr14:69842800-69862800	Strong transcription	Fetal Thymus	thymus
10	chr14:69843400-69863000	Strong transcription	Primary hematopoietic stem cells short term culture	blood
11	chr14:69843600-69862600	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
12	chr14:69843600-69863200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chr14:69843800-69863000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
14	chr14:69843800-69863400	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr14:69843800-69863400	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
16	chr14:69843800-69863400	Strong transcription	HSMM	muscle
17	chr14:69843800-69863800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
18	chr14:69845800-69863000	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
19	chr14:69845800-69863400	Strong transcription	iPS-18 Cell Line	embryonic stem cell
20	chr14:69846000-69863000	Strong transcription	Primary monocytes fromperipheralblood	blood
21	chr14:69846000-69863000	Strong transcription	HUVEC	blood vessel
22	chr14:69846000-69863000	Strong transcription	Monocytes-CD14+_RO01746	blood
23	chr14:69848600-69863400	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
24	chr14:69849400-69863000	Strong transcription	H1 Cell Line	embryonic stem cell
25	chr14:69849400-69863000	Strong transcription	Placenta	Placenta
26	chr14:69849600-69863000	Strong transcription	HMEC	breast
27	chr14:69850200-69863000	Strong transcription	Osteobl	bone
28	chr14:69850400-69863600	Strong transcription	Fetal Muscle Leg	muscle
29	chr14:69851000-69863000	Strong transcription	Fetal Intestine Large	intestine
30	chr14:69851000-69863200	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
31	chr14:69851400-69862600	Strong transcription	NHEK	skin
32	chr14:69851400-69862800	Strong transcription	Fetal Muscle Trunk	muscle
33	chr14:69851600-69862600	Strong transcription	Muscle Satellite Cultured Cells	--
34	chr14:69853000-69863800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
35	chr14:69854200-69864000	Weak transcription	Aorta	Aorta
36	chr14:69855200-69862400	Strong transcription	Primary neutrophils fromperipheralblood	blood
37	chr14:69855200-69863000	Genic enhancers	Primary T helper cells fromperipheralblood	blood
38	chr14:69855400-69862400	Strong transcription	K562	blood
39	chr14:69855400-69862600	Genic enhancers	Primary T helper memory cells from peripheral blood 2	blood
40	chr14:69855800-69863200	Strong transcription	NH-A	brain
41	chr14:69856000-69863000	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
42	chr14:69856000-69863000	Strong transcription	Fetal Lung	lung
43	chr14:69856200-69862800	Strong transcription	NHLF	lung
44	chr14:69856400-69862400	Strong transcription	NHDF-Ad	bronchial
45	chr14:69856400-69862800	Strong transcription	Cortex derived primary cultured neurospheres	brain
46	chr14:69856400-69862800	Strong transcription	Rectal Mucosa Donor 31	rectum
47	chr14:69856400-69863000	Strong transcription	Fetal Kidney	kidney
48	chr14:69856600-69862400	Strong transcription	Brain Anterior Caudate	brain
49	chr14:69856600-69862400	Strong transcription	Skeletal Muscle Female	skeletal muscle
50	chr14:69856600-69862800	Strong transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

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