Variant report

Variant	rs34704551
Chromosome Location	chr1:210107045-210107046
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:210103690..210106151-chr1:210106770..210109170,2	K562	blood:
2	chr1:210099710..210101405-chr1:210104542..210107645,3	K562	blood:

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11590161	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12401646	0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12750599	0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs17318612	0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs17318744	0.84[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2451696	0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2451697	0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2484030	0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2484031	0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2484032	0.84[ASN][1000 genomes]
rs2484034	0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs34931444	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35256257	0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs56131913	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs61820396	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs61820397	0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs61826848	0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6540578	0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6657016	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7543650	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv999901	chr1:209600631-210205379	Flanking Active TSS Enhancers Weak transcription Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	76 gene(s)	inside rSNPs	diseases
2	nsv1014034	chr1:209759648-210501731	Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
3	nsv873140	chr1:210068117-210335644	Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Bivalent/Poised TSS Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
4	esv1844866	chr1:210078078-210108473	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
5	esv1825811	chr1:210082206-210135806	Active TSS Bivalent/Poised TSS Bivalent Enhancer Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:210100200-210107800	Weak transcription	Pancreatic Islets	Pancreatic Islet

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