The 2.0 version of rSNPBase

Variant report

Variant rs34732347
Chromosome Location chr1:192873901-192873902
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:192871800-192875000 Weak transcription Pancreas Pancrea
2 chr1:192872200-192874400 Enhancers Cortex derived primary cultured neurospheres brain
3 chr1:192873400-192874000 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
4 chr1:192873400-192874000 Flanking Active TSS Osteobl bone
5 chr1:192873400-192874400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
6 chr1:192873400-192874400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr1:192873400-192874400 Enhancers HMEC breast
8 chr1:192873400-192874800 Enhancers Hela-S3 cervix
9 chr1:192873400-192878400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr1:192873600-192874000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
11 chr1:192873600-192874000 Enhancers Breast Myoepithelial Primary Cells Breast
12 chr1:192873600-192874000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr1:192873600-192874000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr1:192873600-192874000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
15 chr1:192873600-192874000 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
16 chr1:192873600-192874000 Active TSS Aorta Aorta
17 chr1:192873600-192874000 Active TSS Brain Anterior Caudate brain
18 chr1:192873600-192874000 Active TSS Fetal Lung lung
19 chr1:192873600-192874000 Enhancers Fetal Muscle Leg muscle
20 chr1:192873600-192874000 Flanking Active TSS Ovary ovary
21 chr1:192873600-192874000 Flanking Active TSS Rectal Smooth Muscle rectum
22 chr1:192873600-192874000 Flanking Active TSS HSMM muscle
23 chr1:192873600-192874000 Flanking Active TSS HSMMtube muscle
24 chr1:192873600-192874000 Enhancers HUVEC blood vessel
25 chr1:192873600-192874000 Flanking Active TSS NH-A brain
26 chr1:192873600-192874000 Active TSS NHDF-Ad bronchial
27 chr1:192873600-192874000 Enhancers NHLF lung
28 chr1:192873600-192874200 Enhancers Primary monocytes fromperipheralblood blood
29 chr1:192873600-192874200 Enhancers Adipose Nuclei Adipose
30 chr1:192873600-192874200 Active TSS Stomach Smooth Muscle stomach
31 chr1:192873600-192874400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr1:192873600-192874400 Enhancers Stomach Mucosa stomach
33 chr1:192873600-192874600 Enhancers Primary hematopoietic stem cells short term culture blood
34 chr1:192873600-192874800 Enhancers Monocytes-CD14+_RO01746 blood
35 chr1:192873600-192876800 Enhancers NHEK skin
36 chr1:192873800-192874000 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
37 chr1:192873800-192874000 Active TSS Colon Smooth Muscle Colon
38 chr1:192873800-192874200 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr1:192873800-192874200 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr1:192873800-192874200 Active TSS Muscle Satellite Cultured Cells --
41 chr1:192873800-192874200 Active TSS A549 lung
42 chr1:192873800-192874400 Weak transcription Duodenum Smooth Muscle Duodenum
43 chr1:192873800-192876800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin

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Last update: Aug 31, 2015