The 2.0 version of rSNPBase

Variant report

Variant rs58739396
Chromosome Location chr1:192878272-192878273
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:17 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:192873400-192878400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr1:192874600-192879600 Weak transcription Primary hematopoietic stem cells short term culture blood
3 chr1:192875400-192889200 Weak transcription Pancreas Pancrea
4 chr1:192875600-192878400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
5 chr1:192875600-192878400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
6 chr1:192876600-192878800 Enhancers Rectal Smooth Muscle rectum
7 chr1:192876800-192878400 Enhancers Colon Smooth Muscle Colon
8 chr1:192877600-192878400 Enhancers Muscle Satellite Cultured Cells --
9 chr1:192877600-192878400 Enhancers HSMM muscle
10 chr1:192877600-192881400 Weak transcription HSMMtube muscle
11 chr1:192877800-192879600 Weak transcription Primary neutrophils fromperipheralblood blood
12 chr1:192877800-192884000 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr1:192877800-192884000 Weak transcription Small Intestine intestine
14 chr1:192878000-192881200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
15 chr1:192878000-192883000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr1:192878200-192879400 Weak transcription Monocytes-CD14+_RO01746 blood
17 chr1:192878200-192879600 Weak transcription Primary monocytes fromperipheralblood blood

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Last update: Aug 31, 2015