Variant report

Variant	rs34757357
Chromosome Location	chr7:26291478-26291479
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs1049938	1.00[TSI][hapmap]
rs12700719	1.00[CEU][hapmap]
rs13225692	1.00[CEU][hapmap];1.00[AMR][1000 genomes]
rs13230913	1.00[CEU][hapmap];1.00[TSI][hapmap]
rs13233294	1.00[AMR][1000 genomes]
rs13233506	1.00[AMR][1000 genomes]
rs13245047	1.00[AMR][1000 genomes]
rs17153360	1.00[MEX][hapmap];1.00[TSI][hapmap]
rs17153367	1.00[MEX][hapmap];1.00[TSI][hapmap]
rs17153435	1.00[TSI][hapmap]
rs34031173	1.00[AMR][1000 genomes]
rs35254059	1.00[CEU][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap]
rs35536859	1.00[AMR][1000 genomes]
rs35595411	1.00[AMR][1000 genomes]
rs6959448	1.00[AMR][1000 genomes]
rs71521753	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs71521759	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1021308	chr7:26116605-26419720	Weak transcription Active TSS Enhancers Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	166 gene(s)	inside rSNPs	diseases
2	nsv1018971	chr7:26161228-26380361	Strong transcription Flanking Active TSS Weak transcription Genic enhancers Enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	165 gene(s)	inside rSNPs	diseases
3	esv1821097	chr7:26243108-26303403	Weak transcription Transcr. at gene 5' and 3' Strong transcription Active TSS Flanking Active TSS Genic enhancers Enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:26291200-26291800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
2	chr7:26291400-26291600	Flanking Active TSS	K562	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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