Variant report

Variant	rs34767126
Chromosome Location	chr9:85995333-85995334
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 36 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs10441792	0.83[EUR][1000 genomes]
rs10512140	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10746700	0.83[EUR][1000 genomes]
rs10746701	0.83[EUR][1000 genomes]
rs10746702	0.83[EUR][1000 genomes]
rs10746703	0.83[EUR][1000 genomes]
rs10746705	0.87[ASN][1000 genomes]
rs10780596	0.81[EUR][1000 genomes]
rs10780597	0.83[EUR][1000 genomes]
rs10780601	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10867995	0.83[EUR][1000 genomes]
rs10867998	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs10867999	0.86[EUR][1000 genomes]
rs10868000	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10868001	0.88[AFR][1000 genomes];0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11140040	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs11140041	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs11140045	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs11140046	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs11140054	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs11140056	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12348065	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12350022	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs13300839	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13439910	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1536888	0.83[EUR][1000 genomes]
rs1536889	0.83[EUR][1000 genomes]
rs2375886	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs35469709	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs35498149	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs3860903	0.83[EUR][1000 genomes]
rs3915916	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs4877252	0.83[EUR][1000 genomes]
rs4877253	0.83[EUR][1000 genomes]
rs62560269	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1046491	chr9:85861492-86063992	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:85937400-85998000	Weak transcription	Aorta	Aorta
2	chr9:85958200-86007600	Weak transcription	Skeletal Muscle Male	skeletal muscle
3	chr9:85981000-85997800	Weak transcription	Left Ventricle	heart
4	chr9:85982600-85998800	Weak transcription	Ovary	ovary
5	chr9:85983000-85998400	Weak transcription	Fetal Brain Male	brain
6	chr9:85988400-85995600	Weak transcription	HepG2	liver
7	chr9:85994600-85995400	Enhancers	Pancreas	Pancrea

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