Variant report

Variant	rs34845252
Chromosome Location	chr5:68189005-68189006
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs34044149	0.82[AMR][1000 genomes]
rs34264944	0.84[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs35092707	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs35260480	0.82[AMR][1000 genomes]
rs35428898	0.82[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs35666670	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6891704	0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6891706	0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs71622264	0.90[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs7730743	0.82[AMR][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:68179600-68195200	Weak transcription	H1 Cell Line	embryonic stem cell
2	chr5:68180200-68190400	Weak transcription	Primary T cells fromperipheralblood	blood
3	chr5:68187600-68190600	Weak transcription	Primary T helper cells fromperipheralblood	blood
4	chr5:68188000-68189800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
5	chr5:68188000-68190000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
6	chr5:68188000-68190400	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
7	chr5:68188200-68190400	Weak transcription	Fetal Thymus	thymus
8	chr5:68188200-68190600	Weak transcription	Dnd41	blood
9	chr5:68188600-68189800	Weak transcription	Primary T cells from cord blood	blood

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links