Variant report

Variant	rs71622264
Chromosome Location	chr5:68178987-68178988
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs34044149	0.94[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs34264944	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34845252	0.90[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs35092707	0.95[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs35260480	0.94[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs35428898	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs35666670	0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs6891704	0.96[ASN][1000 genomes]
rs6891706	0.96[ASN][1000 genomes]
rs7730743	0.97[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:68176800-68182400	Weak transcription	NHDF-Ad	bronchial
2	chr5:68177000-68179000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
3	chr5:68178200-68180600	Enhancers	Primary T helper naive cells fromperipheralblood	blood
4	chr5:68178200-68181000	Enhancers	Primary T helper cells PMA-I stimulated	--
5	chr5:68178600-68179600	Enhancers	Primary T cells from cord blood	blood
6	chr5:68178800-68180200	Enhancers	Primary T cells fromperipheralblood	blood
7	chr5:68178800-68180400	Enhancers	Primary T killer naive cells fromperipheralblood	blood
8	chr5:68178800-68180800	Enhancers	Dnd41	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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