The 2.0 version of rSNPBase

Variant report

Variant rs34855090
Chromosome Location chr8:59749122-59749123
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:59715200-59757400 Weak transcription Fetal Intestine Large intestine
2 chr8:59720600-59754800 Weak transcription Small Intestine intestine
3 chr8:59720800-59762600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr8:59722400-59757200 Strong transcription Dnd41 blood
5 chr8:59729600-59754800 Weak transcription Gastric stomach
6 chr8:59730800-59770800 Strong transcription Fetal Thymus thymus
7 chr8:59732200-59755200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
8 chr8:59739000-59753200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr8:59739400-59749200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr8:59739400-59750000 Weak transcription Breast Myoepithelial Primary Cells Breast
11 chr8:59745000-59751000 Strong transcription Primary T cells from cord blood blood
12 chr8:59745600-59770800 Weak transcription Fetal Kidney kidney
13 chr8:59745800-59770800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
14 chr8:59746000-59753800 Weak transcription H9 Cell Line embryonic stem cell
15 chr8:59746400-59751000 Strong transcription Thymus Thymus
16 chr8:59746400-59773200 Weak transcription Fetal Intestine Small intestine
17 chr8:59746600-59752800 Weak transcription Pancreatic Islets Pancreatic Islet
18 chr8:59746600-59754800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr8:59746600-59763600 Weak transcription Primary T helper cells PMA-I stimulated --
20 chr8:59746800-59763600 Weak transcription iPS-18 Cell Line embryonic stem cell
21 chr8:59747000-59749800 Weak transcription Primary hematopoietic stem cells blood
22 chr8:59747000-59750000 Weak transcription HUES48 Cell Line embryonic stem cell
23 chr8:59747000-59755000 Weak transcription HUES6 Cell Line embryonic stem cell
24 chr8:59747000-59755800 Weak transcription Fetal Lung lung
25 chr8:59747000-59757600 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr8:59747200-59749800 Weak transcription iPS-20b Cell Line embryonic stem cell
27 chr8:59747200-59749800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr8:59747200-59754800 Weak transcription HUES64 Cell Line embryonic stem cell
29 chr8:59747400-59750000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr8:59747400-59751000 Weak transcription Lung lung
31 chr8:59747400-59753200 Weak transcription A549 lung
32 chr8:59747400-59753600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr8:59747400-59754400 Weak transcription NH-A brain
34 chr8:59747400-59754400 Weak transcription Osteobl bone
35 chr8:59747400-59754600 Weak transcription NHLF lung
36 chr8:59747400-59755200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
37 chr8:59747400-59757800 Weak transcription Rectal Smooth Muscle rectum
38 chr8:59747400-59760400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
39 chr8:59747400-59770800 Weak transcription Pancreas Pancrea
40 chr8:59747600-59753800 Weak transcription Muscle Satellite Cultured Cells --
41 chr8:59747600-59754400 Weak transcription NHDF-Ad bronchial
42 chr8:59747600-59754600 Weak transcription Sigmoid Colon Sigmoid Colon
43 chr8:59748200-59751000 Strong transcription Primary T cells fromperipheralblood blood
44 chr8:59748200-59751000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
45 chr8:59748200-59751000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
46 chr8:59748200-59751400 Strong transcription Cortex derived primary cultured neurospheres brain
47 chr8:59748400-59749200 Strong transcription Stomach Smooth Muscle stomach
48 chr8:59748400-59751000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr8:59748400-59753600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
50 chr8:59748600-59750800 Strong transcription Primary hematopoietic stem cells short term culture blood

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Last update: Aug 31, 2015