Variant report

Variant	rs34937979
Chromosome Location	chr14:70724849-70724850
allele	-/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs12590427	1.00[AFR][1000 genomes]
rs57195006	1.00[AMR][1000 genomes]
rs57233679	1.00[AMR][1000 genomes]
rs57642196	1.00[AMR][1000 genomes]
rs60130870	1.00[AMR][1000 genomes]
rs61733810	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73278853	1.00[AMR][1000 genomes]
rs73278891	1.00[AMR][1000 genomes]
rs73278895	1.00[AMR][1000 genomes]
rs73280734	1.00[AFR][1000 genomes]
rs73280744	1.00[AFR][1000 genomes]
rs73280764	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73280774	1.00[AMR][1000 genomes]
rs8012417	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv902075	chr14:70612618-70919016	Enhancers Strong transcription Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
2	nsv826972	chr14:70717268-70726035	Active TSS Flanking Bivalent TSS/Enh Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:70721600-70726600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr14:70722200-70726000	Weak transcription	HepG2	liver
3	chr14:70723800-70725000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
4	chr14:70723800-70744200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
5	chr14:70724000-70725800	Weak transcription	ES-I3 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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