The 2.0 version of rSNPBase

Variant report

Variant rs34984079
Chromosome Location chr1:45302794-45302795
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:45286400-45308400 Weak transcription Aorta Aorta
2 chr1:45287200-45307400 Weak transcription Colon Smooth Muscle Colon
3 chr1:45289400-45307600 Weak transcription Brain Cingulate Gyrus brain
4 chr1:45292400-45308200 Weak transcription Rectal Smooth Muscle rectum
5 chr1:45294000-45308200 Weak transcription Gastric stomach
6 chr1:45295400-45308400 Weak transcription Right Ventricle heart
7 chr1:45295800-45305600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr1:45295800-45308000 Weak transcription Brain Germinal Matrix brain
9 chr1:45296000-45307600 Weak transcription Breast Myoepithelial Primary Cells Breast
10 chr1:45297000-45305200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
11 chr1:45297000-45305200 Weak transcription Ovary ovary
12 chr1:45297400-45305200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr1:45297600-45303200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
14 chr1:45298000-45305200 Weak transcription HUES6 Cell Line embryonic stem cell
15 chr1:45298000-45305400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
16 chr1:45298000-45308200 Weak transcription Spleen Spleen
17 chr1:45298200-45305200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
18 chr1:45298800-45308200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr1:45301200-45302800 Enhancers Primary hematopoietic stem cells short term culture blood
20 chr1:45301400-45302800 Enhancers Primary hematopoietic stem cells blood
21 chr1:45301400-45302800 Enhancers Fetal Adrenal Gland Adrenal Gland
22 chr1:45301400-45302800 Enhancers Fetal Kidney kidney
23 chr1:45301800-45305200 Weak transcription Fetal Lung lung
24 chr1:45301800-45307400 Weak transcription Skeletal Muscle Female skeletal muscle
25 chr1:45302000-45303800 Weak transcription Stomach Smooth Muscle stomach
26 chr1:45302000-45305200 Weak transcription ES-I3 Cell Line embryonic stem cell
27 chr1:45302000-45305200 Weak transcription iPS-15b Cell Line embryonic stem cell
28 chr1:45302000-45305200 Weak transcription Fetal Brain Male brain
29 chr1:45302000-45306400 Weak transcription Primary T killer memory cells from peripheral blood blood
30 chr1:45302000-45307200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
31 chr1:45302000-45307400 Weak transcription Brain Anterior Caudate brain
32 chr1:45302000-45307400 Weak transcription Brain Inferior Temporal Lobe brain
33 chr1:45302000-45307600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr1:45302000-45307600 Weak transcription K562 blood
35 chr1:45302000-45308200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr1:45302000-45308200 Weak transcription Brain Hippocampus Middle brain
37 chr1:45302000-45308200 Weak transcription Duodenum Smooth Muscle Duodenum
38 chr1:45302000-45308200 Weak transcription NHDF-Ad bronchial
39 chr1:45302000-45308200 Weak transcription Osteobl bone
40 chr1:45302000-45308400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
41 chr1:45302000-45308400 Weak transcription Muscle Satellite Cultured Cells --
42 chr1:45302000-45308400 Weak transcription HUVEC blood vessel
43 chr1:45302200-45302800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr1:45302200-45303800 Weak transcription HepG2 liver
45 chr1:45302200-45304600 Weak transcription Fetal Muscle Trunk muscle
46 chr1:45302200-45304600 Weak transcription Fetal Muscle Leg muscle
47 chr1:45302200-45305200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
48 chr1:45302200-45305200 Weak transcription Fetal Brain Female brain
49 chr1:45302200-45307200 Weak transcription Brain Angular Gyrus brain
50 chr1:45302200-45308200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015