Variant report

Variant rs11211040
Chromosome Location chr1:45291908-45291909
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:45285600-45292400 Weak transcription Cortex derived primary cultured neurospheres brain
2 chr1:45286200-45301800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
3 chr1:45286400-45292000 Weak transcription H1 Cell Line embryonic stem cell
4 chr1:45286400-45308400 Weak transcription Aorta Aorta
5 chr1:45286600-45292000 Weak transcription ES-I3 Cell Line embryonic stem cell
6 chr1:45286600-45292000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr1:45286600-45292000 Weak transcription Breast Myoepithelial Primary Cells Breast
8 chr1:45286600-45292000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr1:45286600-45292200 Weak transcription iPS-15b Cell Line embryonic stem cell
10 chr1:45286600-45292200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
11 chr1:45286600-45299400 Weak transcription Primary B cells from cord blood blood
12 chr1:45286600-45301600 Weak transcription Right Atrium heart
13 chr1:45286600-45301800 Weak transcription Brain Angular Gyrus brain
14 chr1:45286800-45301600 Weak transcription Duodenum Smooth Muscle Duodenum
15 chr1:45287000-45292000 Strong transcription Fetal Stomach stomach
16 chr1:45287000-45292000 Weak transcription Placenta Amnion Placenta Amnion
17 chr1:45287000-45292200 Weak transcription Esophagus oesophagus
18 chr1:45287000-45301800 Weak transcription Thymus Thymus
19 chr1:45287200-45292000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
20 chr1:45287200-45292000 Weak transcription Fetal Adrenal Gland Adrenal Gland
21 chr1:45287200-45292200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr1:45287200-45292400 Weak transcription Rectal Mucosa Donor 29 rectum
23 chr1:45287200-45293800 Weak transcription Fetal Lung lung
24 chr1:45287200-45295000 Weak transcription Brain Substantia Nigra brain
25 chr1:45287200-45307400 Weak transcription Colon Smooth Muscle Colon
26 chr1:45287400-45292000 Weak transcription Stomach Mucosa stomach
27 chr1:45289400-45292000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
28 chr1:45289400-45307600 Weak transcription Brain Cingulate Gyrus brain
29 chr1:45290000-45292000 Weak transcription Stomach Smooth Muscle stomach
30 chr1:45290000-45292200 Weak transcription Gastric stomach
31 chr1:45290400-45292000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr1:45291600-45292000 Enhancers Primary hematopoietic stem cells short term culture blood
33 chr1:45291600-45293200 Enhancers Primary monocytes fromperipheralblood blood
34 chr1:45291600-45293400 Enhancers Primary hematopoietic stem cells blood
35 chr1:45291800-45292000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr1:45291800-45292000 Enhancers Adipose Nuclei Adipose
37 chr1:45291800-45292000 Enhancers Colonic Mucosa Colon
38 chr1:45291800-45292000 Enhancers Duodenum Mucosa Duodenum
39 chr1:45291800-45292000 Flanking Active TSS Fetal Intestine Small intestine
40 chr1:45291800-45292000 Enhancers Skeletal Muscle Male skeletal muscle
41 chr1:45291800-45292200 Enhancers Primary neutrophils fromperipheralblood blood
42 chr1:45291800-45292200 Enhancers Liver Liver
43 chr1:45291800-45292200 Enhancers Pancreas Pancrea
44 chr1:45291800-45292200 Enhancers Rectal Mucosa Donor 31 rectum
45 chr1:45291800-45292200 Flanking Active TSS HepG2 liver
46 chr1:45291800-45292400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
47 chr1:45291800-45292400 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr1:45291800-45292400 Genic enhancers Brain Anterior Caudate brain
49 chr1:45291800-45292400 Flanking Active TSS Fetal Intestine Large intestine
50 chr1:45291800-45292600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --

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