Variant report

Variant rs7546285
Chromosome Location chr1:45196837-45196838
allele A/C/G
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:45189800-45205000 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr1:45192800-45197200 Weak transcription HSMM muscle
3 chr1:45192800-45197600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr1:45192800-45198200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr1:45192800-45198800 Weak transcription HMEC breast
6 chr1:45193200-45197600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
7 chr1:45193400-45200400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr1:45194800-45197600 Enhancers Primary T helper 17 cells PMA-I stimulated --
9 chr1:45195800-45197000 Enhancers H1 Cell Line embryonic stem cell
10 chr1:45195800-45197200 Enhancers Placenta Placenta
11 chr1:45196000-45197000 Flanking Active TSS Rectal Mucosa Donor 29 rectum
12 chr1:45196000-45197000 Flanking Active TSS Monocytes-CD14+_RO01746 blood
13 chr1:45196000-45197200 Flanking Active TSS Primary neutrophils fromperipheralblood blood
14 chr1:45196000-45197200 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
15 chr1:45196000-45197200 Weak transcription NHEK skin
16 chr1:45196000-45197600 Flanking Active TSS Primary T helper cells PMA-I stimulated --
17 chr1:45196200-45197000 Enhancers HUES64 Cell Line embryonic stem cell
18 chr1:45196200-45197000 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr1:45196200-45197000 Flanking Active TSS Primary T cells from cord blood blood
20 chr1:45196200-45197000 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
21 chr1:45196200-45197000 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
22 chr1:45196200-45197000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr1:45196200-45197000 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
24 chr1:45196200-45197000 Active TSS Brain Angular Gyrus brain
25 chr1:45196200-45197000 Active TSS Brain Dorsolateral Prefrontal Cortex brain
26 chr1:45196200-45197000 Active TSS Pancreatic Islets Pancreatic Islet
27 chr1:45196200-45197000 Flanking Active TSS Fetal Thymus thymus
28 chr1:45196200-45197000 Active TSS Placenta Amnion Placenta Amnion
29 chr1:45196200-45197000 Flanking Active TSS Skeletal Muscle Male skeletal muscle
30 chr1:45196200-45197200 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
31 chr1:45196200-45197200 Flanking Active TSS Primary T helper cells fromperipheralblood blood
32 chr1:45196200-45197200 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
33 chr1:45196200-45197200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr1:45196200-45197200 Enhancers Primary mononuclear cells fromperipheralblood Blood
35 chr1:45196200-45197200 Active TSS Brain Inferior Temporal Lobe brain
36 chr1:45196200-45197200 Active TSS Fetal Kidney kidney
37 chr1:45196200-45197200 Enhancers NHLF lung
38 chr1:45196200-45197800 Enhancers iPS-18 Cell Line embryonic stem cell
39 chr1:45196200-45199800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
40 chr1:45196400-45197000 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr1:45196400-45197000 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
42 chr1:45196400-45197000 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
43 chr1:45196400-45197000 Active TSS Liver Liver
44 chr1:45196400-45197000 Flanking Active TSS Fetal Stomach stomach
45 chr1:45196400-45197000 Active TSS Right Atrium heart
46 chr1:45196400-45197000 Flanking Active TSS Stomach Mucosa stomach
47 chr1:45196400-45197000 Flanking Active TSS Dnd41 blood
48 chr1:45196400-45197000 Flanking Active TSS NHDF-Ad bronchial
49 chr1:45196400-45197000 Flanking Active TSS Osteobl bone
50 chr1:45196400-45197200 Active TSS IMR90 fetal lung fibroblasts Cell Line lung

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