Variant report

Variant	rs35167018
Chromosome Location	chr5:36826023-36826024
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:36825884..36828546-chr5:36876173..36877815,2	K562	blood:

Variant related genes	Relation type
ENSG00000164190	Chromatin interaction

Extended variants
information (count: 43 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:40)

rs_ID	r²[population]
rs13156908	0.95[EUR][1000 genomes]
rs13162626	0.92[EUR][1000 genomes]
rs13163996	0.92[EUR][1000 genomes]
rs13164726	0.80[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs13176635	0.95[EUR][1000 genomes]
rs13181330	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs13181860	0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs13186745	0.85[EUR][1000 genomes]
rs13187028	0.95[EUR][1000 genomes]
rs1353256	0.85[EUR][1000 genomes]
rs16903418	0.92[EUR][1000 genomes]
rs17312211	0.94[EUR][1000 genomes]
rs188383	0.87[EUR][1000 genomes]
rs213513	0.93[EUR][1000 genomes]
rs289216	0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs293753	0.92[EUR][1000 genomes]
rs293754	0.92[EUR][1000 genomes]
rs293775	0.87[EUR][1000 genomes]
rs298973	0.93[EUR][1000 genomes]
rs34218486	0.91[EUR][1000 genomes]
rs34272373	0.92[EUR][1000 genomes]
rs34697946	0.92[EUR][1000 genomes]
rs34807025	0.87[AFR][1000 genomes];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs34911537	0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs35127161	0.95[EUR][1000 genomes]
rs35357341	0.87[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs35394109	0.92[EUR][1000 genomes]
rs35809470	0.93[EUR][1000 genomes]
rs36035695	0.94[EUR][1000 genomes]
rs3776594	0.93[EUR][1000 genomes]
rs58123624	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62654860	0.93[EUR][1000 genomes]
rs6868809	0.85[EUR][1000 genomes]
rs6894622	0.85[EUR][1000 genomes]
rs71617772	0.88[EUR][1000 genomes]
rs71617774	0.92[EUR][1000 genomes]
rs7700441	0.92[EUR][1000 genomes]
rs7704442	0.93[EUR][1000 genomes]
rs7716192	0.93[EUR][1000 genomes]
rs923957	0.94[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv492319	chr5:36570707-37061019	Weak transcription Active TSS Flanking Active TSS Strong transcription Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
2	nsv527961	chr5:36781051-36828730	Enhancers Weak transcription Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	nsv525478	chr5:36804225-37349895	Strong transcription Transcr. at gene 5' and 3' Active TSS Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:36825800-36826400	Enhancers	Fetal Heart	heart

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