Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:70377788..70380653-chr6:70882323..70884515,2	K562	blood:
2	chr6:70378299..70380023-chr6:70421713..70423506,2	K562	blood:

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs1026441	0.86[AFR][1000 genomes]
rs12175229	0.85[AFR][1000 genomes]
rs12661224	0.85[AFR][1000 genomes]
rs13204219	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1542412	0.86[AFR][1000 genomes]
rs17765037	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2045444	0.86[AFR][1000 genomes]
rs2125022	0.85[AFR][1000 genomes]
rs2881080	0.82[AFR][1000 genomes]
rs34064969	0.85[ASN][1000 genomes]
rs3823079	0.84[AFR][1000 genomes]
rs4516910	0.86[AFR][1000 genomes]
rs45559535	0.85[AFR][1000 genomes]
rs4706273	0.85[AFR][1000 genomes]
rs61305080	0.85[ASN][1000 genomes]
rs62408993	0.84[AFR][1000 genomes]
rs67678871	0.80[AFR][1000 genomes]
rs727237	0.97[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs72910810	0.85[AFR][1000 genomes]
rs8180582	0.86[AFR][1000 genomes]
rs9342769	0.83[AFR][1000 genomes]
rs9346332	0.85[AFR][1000 genomes]
rs9346343	0.85[AFR][1000 genomes]
rs9351772	0.85[AFR][1000 genomes]
rs9354881	0.85[AFR][1000 genomes]
rs9354883	0.80[AFR][1000 genomes]
rs9364051	0.85[AFR][1000 genomes]
rs9364054	0.83[AFR][1000 genomes]
rs9364057	0.82[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv886140	chr6:70354682-70728202	Strong transcription Enhancers Genic enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:70374000-70380600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr6:70374200-70382200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
3	chr6:70374200-70383200	Weak transcription	Fetal Muscle Leg	muscle
4	chr6:70375800-70381800	Weak transcription	GM12878-XiMat	blood
5	chr6:70376400-70382600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
6	chr6:70376600-70380200	Weak transcription	Sigmoid Colon	Sigmoid Colon
7	chr6:70376800-70382400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
8	chr6:70377200-70380800	Weak transcription	Primary T helper cells fromperipheralblood	blood
9	chr6:70377600-70382400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
10	chr6:70377600-70392800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
11	chr6:70377800-70380000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
12	chr6:70378200-70380000	Weak transcription	Liver	Liver

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