Variant report

Variant	rs35217922
Chromosome Location	chr14:68777753-68777754
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:9)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:9 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr14:68770678..68778907-chr14:69255944..69264299,32	MCF-7	breast:
2	chr14:68771546..68782546-chr14:69251132..69265678,35	MCF-7	breast:
3	chr14:68771578..68778202-chr14:68921843..68928978,14	MCF-7	breast:
4	chr14:68408294..68410431-chr14:68776471..68779098,2	MCF-7	breast:
5	chr14:68774488..68779341-chr14:69281641..69286880,6	MCF-7	breast:
6	chr14:68772744..68775505-chr14:68776468..68778745,2	MCF-7	breast:
7	chr14:68775195..68777940-chr14:69277333..69279325,2	MCF-7	breast:
8	chr14:68773029..68777937-chr14:68858584..68866534,13	MCF-7	breast:
9	chr14:68776230..68777818-chr14:69035775..69037380,2	MCF-7	breast:

No data

Variant related genes	Relation type
ENSG00000185650	Chromatin interaction

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs10146929	1.00[EUR][1000 genomes]
rs10151522	1.00[EUR][1000 genomes]
rs7143425	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869154	chr14:68366754-69041768	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
2	nsv428628	chr14:68674504-68835127	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:59 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:68769000-68810000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr14:68772000-68777800	Enhancers	Fetal Kidney	kidney
3	chr14:68772000-68788400	Enhancers	Primary B cells from peripheral blood	blood
4	chr14:68772600-68788000	Weak transcription	Lung	lung
5	chr14:68774200-68777800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr14:68774400-68785200	Weak transcription	Psoas Muscle	Psoas
7	chr14:68774800-68778000	Weak transcription	Sigmoid Colon	Sigmoid Colon
8	chr14:68774800-68778400	Enhancers	Primary B cells from cord blood	blood
9	chr14:68774800-68779000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
10	chr14:68774800-68779600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr14:68774800-68780200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
12	chr14:68775000-68779000	Weak transcription	HepG2	liver
13	chr14:68775000-68779400	Weak transcription	HUES48 Cell Line	embryonic stem cell
14	chr14:68775600-68779000	Enhancers	Primary T cells from cord blood	blood
15	chr14:68775600-68780000	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
16	chr14:68775800-68779000	Weak transcription	HUES64 Cell Line	embryonic stem cell
17	chr14:68775800-68779200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
18	chr14:68775800-68780000	Weak transcription	Fetal Brain Male	brain
19	chr14:68775800-68781000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
20	chr14:68776000-68778000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
21	chr14:68776000-68779000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
22	chr14:68776000-68779000	Weak transcription	Liver	Liver
23	chr14:68776000-68779800	Weak transcription	Brain Anterior Caudate	brain
24	chr14:68776200-68779400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
25	chr14:68776200-68779600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
26	chr14:68776200-68779800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
27	chr14:68776200-68779800	Weak transcription	Brain Angular Gyrus	brain
28	chr14:68776200-68780000	Weak transcription	Brain Cingulate Gyrus	brain
29	chr14:68776200-68781800	Weak transcription	Stomach Smooth Muscle	stomach
30	chr14:68776200-68789400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
31	chr14:68776400-68778400	Enhancers	Primary T helper cells fromperipheralblood	blood
32	chr14:68776400-68785400	Weak transcription	Brain Inferior Temporal Lobe	brain
33	chr14:68776600-68779000	Enhancers	GM12878-XiMat	blood
34	chr14:68776600-68779600	Weak transcription	Fetal Muscle Leg	muscle
35	chr14:68776600-68779600	Weak transcription	Fetal Stomach	stomach
36	chr14:68776600-68780000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
37	chr14:68776600-68780000	Weak transcription	Fetal Muscle Trunk	muscle
38	chr14:68776600-68780000	Weak transcription	Spleen	Spleen
39	chr14:68776600-68780200	Weak transcription	Brain Substantia Nigra	brain
40	chr14:68776600-68780200	Weak transcription	Ovary	ovary
41	chr14:68777000-68778800	Weak transcription	Brain Hippocampus Middle	brain
42	chr14:68777000-68778800	Weak transcription	Fetal Lung	lung
43	chr14:68777000-68778800	Weak transcription	Pancreas	Pancrea
44	chr14:68777000-68779000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
45	chr14:68777000-68779200	Weak transcription	Cortex derived primary cultured neurospheres	brain
46	chr14:68777000-68780200	Weak transcription	Fetal Thymus	thymus
47	chr14:68777000-68781800	Weak transcription	Small Intestine	intestine
48	chr14:68777000-68785800	Weak transcription	Colon Smooth Muscle	Colon
49	chr14:68777000-68792200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
50	chr14:68777000-68793400	Weak transcription	Primary hematopoietic stem cells	blood

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