Variant report

Variant	rs35285670
Chromosome Location	chr7:67383733-67383734
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 29 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs12698634	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13240999	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13241113	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13241289	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17137400	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17144943	0.98[AFR][1000 genomes]
rs17144952	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34075703	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34330232	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34450046	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34464135	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34731845	1.00[AMR][1000 genomes];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs35107817	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35395078	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35527248	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36106198	0.87[ASN][1000 genomes]
rs62457596	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62457598	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62457599	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62457600	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62457601	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62640512	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6943649	0.95[AFR][1000 genomes]
rs6945224	1.00[AFR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6964247	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7778901	0.95[AFR][1000 genomes]
rs7810283	0.95[AFR][1000 genomes]
rs957354	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1027532	chr7:67261526-67387398	Active TSS Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:67383000-67384600	ZNF genes & repeats	Monocytes-CD14+_RO01746	blood
2	chr7:67383200-67383800	ZNF genes & repeats	Primary T helper cells PMA-I stimulated	--
3	chr7:67383200-67384000	ZNF genes & repeats	ES-I3 Cell Line	embryonic stem cell
4	chr7:67383200-67388200	Weak transcription	Fetal Brain Male	brain
5	chr7:67383400-67383800	ZNF genes & repeats	Dnd41	blood
6	chr7:67383400-67384200	ZNF genes & repeats	Primary hematopoietic stem cells short term culture	blood
7	chr7:67383600-67384000	Enhancers	Primary T cells fromperipheralblood	blood

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