Variant report

Variant	rs7778901
Chromosome Location	chr7:67376275-67376276
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 22 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs13240999	0.95[AFR][1000 genomes]
rs13241113	0.95[AFR][1000 genomes]
rs17137400	0.95[AFR][1000 genomes]
rs17144943	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17144952	0.95[AFR][1000 genomes]
rs34450046	0.95[AFR][1000 genomes]
rs34464135	0.95[AFR][1000 genomes]
rs35285670	0.95[AFR][1000 genomes]
rs35395078	0.95[AFR][1000 genomes]
rs35527248	0.95[AFR][1000 genomes]
rs62457596	0.95[AFR][1000 genomes]
rs62457599	0.95[AFR][1000 genomes]
rs62457600	0.95[AFR][1000 genomes]
rs62457601	0.95[AFR][1000 genomes]
rs62640512	0.95[AFR][1000 genomes]
rs6943649	1.00[AFR][1000 genomes]
rs6945224	0.95[AFR][1000 genomes]
rs6964247	0.95[AFR][1000 genomes]
rs7779038	0.81[AFR][1000 genomes]
rs7810283	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs957354	0.95[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1027532	chr7:67261526-67387398	Active TSS Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:67376000-67376400	Active TSS	Stomach Mucosa	stomach

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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