Variant report

Variant rs35337578
Chromosome Location chr6:31938451-31938452
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:31927400-31938800 Weak transcription Right Atrium heart
2 chr6:31927600-31939400 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr6:31927800-31938600 Strong transcription NHEK skin
4 chr6:31928000-31938600 Strong transcription Rectal Smooth Muscle rectum
5 chr6:31928000-31938600 Strong transcription Sigmoid Colon Sigmoid Colon
6 chr6:31928000-31938800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
7 chr6:31929000-31938600 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr6:31934000-31938600 Weak transcription Psoas Muscle Psoas
9 chr6:31934400-31939200 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
10 chr6:31935200-31938600 Weak transcription Fetal Heart heart
11 chr6:31936000-31938600 Weak transcription Stomach Mucosa stomach
12 chr6:31936800-31938600 Transcr. at gene 5' and 3' K562 blood
13 chr6:31936800-31938800 Transcr. at gene 5' and 3' Foreskin Melanocyte Primary Cells skin01 Skin
14 chr6:31936800-31939200 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr6:31937200-31938600 Genic enhancers Muscle Satellite Cultured Cells --
16 chr6:31937200-31938800 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
17 chr6:31937200-31939200 Genic enhancers Spleen Spleen
18 chr6:31937400-31938600 Genic enhancers Brain Inferior Temporal Lobe brain
19 chr6:31937400-31938800 Genic enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr6:31937400-31939000 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr6:31937400-31939200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr6:31937600-31938600 Transcr. at gene 5' and 3' Stomach Smooth Muscle stomach
23 chr6:31937600-31938800 Genic enhancers Right Ventricle heart
24 chr6:31937600-31939000 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
25 chr6:31937600-31939000 Transcr. at gene 5' and 3' Brain Dorsolateral Prefrontal Cortex brain
26 chr6:31937600-31939000 Genic enhancers Duodenum Smooth Muscle Duodenum
27 chr6:31937800-31938600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr6:31937800-31938600 Transcr. at gene 5' and 3' Ganglion Eminence derived primary cultured neurospheres brain
29 chr6:31937800-31938600 Genic enhancers Rectal Mucosa Donor 29 rectum
30 chr6:31937800-31938600 Transcr. at gene 5' and 3' Dnd41 blood
31 chr6:31937800-31938800 Weak transcription iPS-15b Cell Line embryonic stem cell
32 chr6:31937800-31938800 Genic enhancers Primary T regulatory cells fromperipheralblood blood
33 chr6:31937800-31938800 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr6:31937800-31938800 Genic enhancers Fetal Thymus thymus
35 chr6:31937800-31938800 Genic enhancers Gastric stomach
36 chr6:31937800-31939000 Genic enhancers Cortex derived primary cultured neurospheres brain
37 chr6:31937800-31939200 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr6:31937800-31939400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
39 chr6:31938000-31938600 Transcr. at gene 5' and 3' Breast Myoepithelial Primary Cells Breast
40 chr6:31938000-31938600 Genic enhancers Primary T cells fromperipheralblood blood
41 chr6:31938000-31938600 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr6:31938000-31938600 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
43 chr6:31938000-31938600 Genic enhancers Adipose Nuclei Adipose
44 chr6:31938000-31938600 Transcr. at gene 5' and 3' Fetal Brain Female brain
45 chr6:31938000-31938600 Transcr. at gene 5' and 3' Pancreas Pancrea
46 chr6:31938000-31938600 Weak transcription HSMM muscle
47 chr6:31938000-31938800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr6:31938000-31938800 Genic enhancers Primary T helper cells PMA-I stimulated --
49 chr6:31938000-31938800 Genic enhancers Brain Anterior Caudate brain
50 chr6:31938000-31938800 Genic enhancers Fetal Stomach stomach

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