Variant report

Variant rs12198173
Chromosome Location chr6:32026808-32026809
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:32008800-32035200 Weak transcription Aorta Aorta
2 chr6:32014800-32048800 Weak transcription Right Atrium heart
3 chr6:32015000-32030600 Strong transcription Fetal Stomach stomach
4 chr6:32015000-32048400 Weak transcription Fetal Lung lung
5 chr6:32015200-32052600 Weak transcription Brain Angular Gyrus brain
6 chr6:32016200-32034200 Weak transcription NHDF-Ad bronchial
7 chr6:32016400-32037800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr6:32016400-32050000 Weak transcription Duodenum Mucosa Duodenum
9 chr6:32016600-32029000 Weak transcription Breast Myoepithelial Primary Cells Breast
10 chr6:32016600-32042400 Strong transcription Placenta Amnion Placenta Amnion
11 chr6:32016600-32048400 Weak transcription Rectal Smooth Muscle rectum
12 chr6:32016600-32050600 Weak transcription Pancreas Pancrea
13 chr6:32016800-32046400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
14 chr6:32017000-32039800 Weak transcription Colon Smooth Muscle Colon
15 chr6:32017000-32048800 Weak transcription Colonic Mucosa Colon
16 chr6:32017200-32038000 Strong transcription Fetal Muscle Leg muscle
17 chr6:32018800-32038000 Strong transcription Fetal Muscle Trunk muscle
18 chr6:32022800-32038400 Weak transcription Skeletal Muscle Female skeletal muscle
19 chr6:32023400-32029800 Weak transcription Stomach Smooth Muscle stomach
20 chr6:32024000-32029000 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr6:32024800-32032400 Weak transcription Gastric stomach
22 chr6:32025600-32027000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
23 chr6:32025600-32027800 Strong transcription Left Ventricle heart
24 chr6:32025800-32027000 Enhancers Cortex derived primary cultured neurospheres brain
25 chr6:32026000-32027000 Enhancers Brain Hippocampus Middle brain
26 chr6:32026000-32027000 Enhancers HUVEC blood vessel
27 chr6:32026000-32027000 Bivalent Enhancer Osteobl bone
28 chr6:32026000-32027600 Genic enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr6:32026000-32028800 Weak transcription Spleen Spleen
30 chr6:32026000-32043400 Weak transcription Esophagus oesophagus
31 chr6:32026200-32027000 Bivalent Enhancer Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr6:32026200-32027000 Genic enhancers Adipose Nuclei Adipose
33 chr6:32026200-32028600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
34 chr6:32026200-32029000 Weak transcription Fetal Intestine Small intestine
35 chr6:32026200-32029800 Weak transcription Fetal Intestine Large intestine
36 chr6:32026400-32027200 Weak transcription Ovary ovary
37 chr6:32026400-32028800 Weak transcription Lung lung
38 chr6:32026400-32028800 Weak transcription Skeletal Muscle Male skeletal muscle
39 chr6:32026400-32029000 Weak transcription Right Ventricle heart
40 chr6:32026600-32027000 Enhancers Brain Inferior Temporal Lobe brain
41 chr6:32026600-32028000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
42 chr6:32026600-32029600 Weak transcription Placenta Placenta
43 chr6:32026600-32029800 Weak transcription Rectal Mucosa Donor 29 rectum
44 chr6:32026800-32027000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr6:32026800-32027000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr6:32026800-32027000 Enhancers Brain Substantia Nigra brain
47 chr6:32026800-32029200 Weak transcription Fetal Kidney kidney
48 chr6:32026800-32031200 Weak transcription Rectal Mucosa Donor 31 rectum
49 chr6:32026800-32031400 Weak transcription Duodenum Smooth Muscle Duodenum
50 chr6:32026800-32036800 Weak transcription Brain Anterior Caudate brain

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