Variant report

Variant rs12153855
Chromosome Location chr6:32074804-32074805
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:32065000-32075400 Weak transcription Esophagus oesophagus
2 chr6:32065200-32075200 Weak transcription Pancreas Pancrea
3 chr6:32072800-32075200 Enhancers Ovary ovary
4 chr6:32073200-32075400 Weak transcription Breast Myoepithelial Primary Cells Breast
5 chr6:32073600-32075200 Weak transcription Colonic Mucosa Colon
6 chr6:32073600-32075200 Active TSS Duodenum Smooth Muscle Duodenum
7 chr6:32073600-32075200 Enhancers Hela-S3 cervix
8 chr6:32073800-32075400 Enhancers Right Ventricle heart
9 chr6:32074000-32076200 Enhancers Lung lung
10 chr6:32074000-32076800 Enhancers Spleen Spleen
11 chr6:32074000-32079800 Enhancers Gastric stomach
12 chr6:32074200-32075200 Transcr. at gene 5' and 3' Fetal Muscle Leg muscle
13 chr6:32074200-32075600 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin01 Skin
14 chr6:32074400-32075000 Flanking Active TSS Stomach Smooth Muscle stomach
15 chr6:32074400-32075200 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin02 Skin
16 chr6:32074400-32075400 Active TSS Rectal Mucosa Donor 29 rectum
17 chr6:32074400-32075600 Enhancers Fetal Intestine Small intestine
18 chr6:32074400-32075600 Enhancers Left Ventricle heart
19 chr6:32074400-32075800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr6:32074400-32076000 Flanking Bivalent TSS/Enh Skeletal Muscle Male skeletal muscle
21 chr6:32074400-32076000 Flanking Active TSS NHDF-Ad bronchial
22 chr6:32074400-32076200 Bivalent Enhancer Fetal Lung lung
23 chr6:32074400-32076200 Enhancers Placenta Placenta
24 chr6:32074600-32075000 Weak transcription Rectal Mucosa Donor 31 rectum
25 chr6:32074600-32075600 Enhancers Stomach Mucosa stomach
26 chr6:32074600-32075800 Enhancers Fetal Stomach stomach
27 chr6:32074600-32075800 Flanking Active TSS Skeletal Muscle Female skeletal muscle
28 chr6:32074600-32076000 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr6:32074600-32077800 Enhancers Primary T helper naive cells fromperipheralblood blood
30 chr6:32074800-32075000 Bivalent Enhancer H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr6:32074800-32075200 Enhancers Aorta Aorta
32 chr6:32074800-32075200 Active TSS Colon Smooth Muscle Colon
33 chr6:32074800-32075200 Enhancers Placenta Amnion Placenta Amnion
34 chr6:32074800-32075200 Flanking Active TSS Rectal Smooth Muscle rectum
35 chr6:32074800-32075400 Enhancers Right Atrium heart
36 chr6:32074800-32075600 Enhancers Duodenum Mucosa Duodenum
37 chr6:32074800-32075800 Enhancers NHEK skin
38 chr6:32074800-32076000 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr6:32074800-32076000 Flanking Active TSS Adipose Nuclei Adipose
40 chr6:32074800-32076000 Enhancers Fetal Heart heart
41 chr6:32074800-32076000 Flanking Active TSS NHLF lung
42 chr6:32074800-32076200 Bivalent Enhancer IMR90 fetal lung fibroblasts Cell Line lung
43 chr6:32074800-32076400 Bivalent Enhancer Muscle Satellite Cultured Cells --
44 chr6:32074800-32076800 Flanking Active TSS Fetal Muscle Trunk muscle

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