Variant report

Variant rs3134608
Chromosome Location chr6:32117971-32117972
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:32110400-32118800 Weak transcription Rectal Mucosa Donor 31 rectum
2 chr6:32114800-32118800 Weak transcription K562 blood
3 chr6:32114800-32119200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr6:32114800-32119200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
5 chr6:32114800-32120000 Weak transcription HepG2 liver
6 chr6:32115200-32118400 Weak transcription Aorta Aorta
7 chr6:32115400-32120400 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
8 chr6:32115600-32119800 Weak transcription Hela-S3 cervix
9 chr6:32115800-32118000 Weak transcription Rectal Smooth Muscle rectum
10 chr6:32116000-32118800 Weak transcription NHLF lung
11 chr6:32116000-32120200 Active TSS H9 Cell Line embryonic stem cell
12 chr6:32116600-32120000 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
13 chr6:32116800-32118200 Flanking Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
14 chr6:32116800-32118600 Transcr. at gene 5' and 3' iPS DF 19.11 Cell Line embryonic stem cell
15 chr6:32116800-32118800 Active TSS Brain Inferior Temporal Lobe brain
16 chr6:32117000-32118000 Weak transcription Colonic Mucosa Colon
17 chr6:32117000-32118800 Bivalent/Poised TSS Brain Germinal Matrix brain
18 chr6:32117000-32119800 Bivalent Enhancer Fetal Thymus thymus
19 chr6:32117000-32119800 Weak transcription HMEC breast
20 chr6:32117200-32118000 Weak transcription Breast Myoepithelial Primary Cells Breast
21 chr6:32117200-32118000 Bivalent Enhancer Primary T helper cells PMA-I stimulated --
22 chr6:32117200-32118000 Bivalent Enhancer Fetal Stomach stomach
23 chr6:32117200-32118200 Weak transcription Right Atrium heart
24 chr6:32117200-32118400 Bivalent Enhancer Primary T cells fromperipheralblood blood
25 chr6:32117200-32118400 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
26 chr6:32117200-32118600 Weak transcription Primary T killer naive cells fromperipheralblood blood
27 chr6:32117200-32118800 Weak transcription Duodenum Mucosa Duodenum
28 chr6:32117200-32118800 Weak transcription Fetal Kidney kidney
29 chr6:32117200-32118800 Bivalent Enhancer Fetal Muscle Trunk muscle
30 chr6:32117200-32119000 Enhancers Primary T helper cells fromperipheralblood blood
31 chr6:32117200-32119200 Bivalent Enhancer Cortex derived primary cultured neurospheres brain
32 chr6:32117200-32119200 Weak transcription Esophagus oesophagus
33 chr6:32117200-32119800 Bivalent Enhancer Fetal Muscle Leg muscle
34 chr6:32117200-32120000 Weak transcription Pancreas Pancrea
35 chr6:32117200-32120800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
36 chr6:32117200-32121200 Weak transcription Gastric stomach
37 chr6:32117400-32118200 Enhancers Right Ventricle heart
38 chr6:32117400-32118400 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr6:32117400-32118600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr6:32117400-32118600 Bivalent Enhancer Placenta Amnion Placenta Amnion
41 chr6:32117400-32118800 Enhancers Primary hematopoietic stem cells blood
42 chr6:32117400-32118800 Enhancers Primary T helper naive cells fromperipheralblood blood
43 chr6:32117400-32119200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr6:32117600-32118000 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
45 chr6:32117600-32118000 Active TSS Brain Cingulate Gyrus brain
46 chr6:32117600-32118000 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
47 chr6:32117600-32118000 Enhancers Stomach Smooth Muscle stomach
48 chr6:32117600-32118200 Flanking Bivalent TSS/Enh HUES48 Cell Line embryonic stem cell
49 chr6:32117600-32118200 Flanking Bivalent TSS/Enh HUES6 Cell Line embryonic stem cell
50 chr6:32117600-32118200 Bivalent Enhancer Duodenum Smooth Muscle Duodenum

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