Variant report

Variant rs3130281
Chromosome Location chr6:32123973-32123974
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:32122600-32134400 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr6:32123000-32125400 Weak transcription Aorta Aorta
3 chr6:32123000-32126000 Weak transcription A549 lung
4 chr6:32123000-32131600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr6:32123000-32134400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr6:32123200-32124200 Weak transcription iPS-20b Cell Line embryonic stem cell
7 chr6:32123200-32124400 Enhancers Primary T helper naive cells fromperipheralblood blood
8 chr6:32123200-32124600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr6:32123200-32125400 Weak transcription iPS-15b Cell Line embryonic stem cell
10 chr6:32123200-32125400 Weak transcription HSMM muscle
11 chr6:32123200-32125400 Weak transcription HSMMtube muscle
12 chr6:32123200-32126200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr6:32123200-32126200 Weak transcription Primary T regulatory cells fromperipheralblood blood
14 chr6:32123200-32135000 Weak transcription Primary monocytes fromperipheralblood blood
15 chr6:32123200-32136200 Weak transcription GM12878-XiMat blood
16 chr6:32123200-32136400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr6:32123200-32142200 Weak transcription Pancreatic Islets Pancreatic Islet
18 chr6:32123200-32142200 Weak transcription Small Intestine intestine
19 chr6:32123200-32142600 Weak transcription Psoas Muscle Psoas
20 chr6:32123200-32142600 Weak transcription HUVEC blood vessel
21 chr6:32123400-32124200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr6:32123400-32124200 Weak transcription Osteobl bone
23 chr6:32123400-32124400 Genic enhancers Fetal Brain Male brain
24 chr6:32123400-32124400 Weak transcription NH-A brain
25 chr6:32123400-32125000 Weak transcription NHEK skin
26 chr6:32123400-32125200 Weak transcription Muscle Satellite Cultured Cells --
27 chr6:32123400-32125400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr6:32123400-32125400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
29 chr6:32123400-32125400 Weak transcription NHDF-Ad bronchial
30 chr6:32123400-32126800 Strong transcription H9 Cell Line embryonic stem cell
31 chr6:32123400-32127000 Strong transcription HUES6 Cell Line embryonic stem cell
32 chr6:32123400-32127200 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr6:32123400-32127600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr6:32123400-32135000 Weak transcription Right Atrium heart
35 chr6:32123400-32135600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
36 chr6:32123600-32124000 Weak transcription Brain Substantia Nigra brain
37 chr6:32123600-32124200 Weak transcription Adipose Nuclei Adipose
38 chr6:32123600-32124200 Weak transcription Right Ventricle heart
39 chr6:32123600-32124400 Genic enhancers K562 blood
40 chr6:32123600-32124600 Genic enhancers Breast Myoepithelial Primary Cells Breast
41 chr6:32123600-32124800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr6:32123600-32125200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr6:32123600-32125400 Weak transcription Gastric stomach
44 chr6:32123600-32125400 Weak transcription Spleen Spleen
45 chr6:32123600-32126800 Strong transcription H1 Cell Line embryonic stem cell
46 chr6:32123600-32126800 Strong transcription HUES48 Cell Line embryonic stem cell
47 chr6:32123600-32126800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
48 chr6:32123600-32126800 Strong transcription Brain Angular Gyrus brain
49 chr6:32123600-32126800 Strong transcription Brain Anterior Caudate brain
50 chr6:32123600-32126800 Strong transcription Brain Dorsolateral Prefrontal Cortex brain

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