Variant report

Variant	rs28732176
Chromosome Location	chr6:32097290-32097291
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:28)
CpG islands
(count:61)
Chromatin interactive
region (count:28)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:28 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	NFYB	chr6:32097016-32097599	K562	blood:	n/a	n/a
2	CTCF	chr6:32096890-32097328	K562	blood:	n/a	n/a
3	TBL1XR1	chr6:32096976-32097382	K562	blood:	n/a	n/a
4	POLR2A	chr6:32095244-32097357	K562	blood:	n/a	n/a
5	RCOR1	chr6:32097246-32098379	Hela-S3	cervix:	n/a	n/a
6	TBL1XR1	chr6:32096972-32098303	K562	blood:	n/a	n/a
7	MAFK	chr6:32097040-32097351	K562	blood:	n/a	n/a
8	MAX	chr6:32097006-32097304	K562	blood:	n/a	n/a
9	RCOR1	chr6:32097025-32098944	K562	blood:	n/a	n/a
10	CTCF	chr6:32097021-32097309	K562	blood:	n/a	n/a
11	CCNT2	chr6:32097232-32097646	K562	blood:	n/a	n/a
12	MAX	chr6:32096997-32097296	K562	blood:	n/a	n/a
13	ZNF384	chr6:32096862-32097307	K562	blood:	n/a	n/a
14	JUND	chr6:32097091-32097328	K562	blood:	n/a	n/a
15	CUX1	chr6:32096962-32097410	K562	blood:	n/a	n/a
16	TEAD4	chr6:32096604-32098889	K562	blood:	n/a	n/a
17	UBTF	chr6:32096980-32098274	K562	blood:	n/a	n/a
18	REST	chr6:32096788-32097375	K562	blood:	n/a	n/a
19	JUN	chr6:32094511-32098913	K562	blood:	n/a	chr6:32094772-32094779 chr6:32098015-32098024 chr6:32098153-32098162 chr6:32094772-32094780 chr6:32094772-32094781
20	HCFC1	chr6:32096931-32098659	K562	blood:	n/a	n/a
21	UBTF	chr6:32097030-32097601	K562	blood:	n/a	n/a
22	YY1	chr6:32096955-32097349	K562	blood:	n/a	n/a
23	NR2F2	chr6:32095453-32097315	K562	blood:	n/a	n/a
24	MYC	chr6:32096928-32097307	K562	blood:	n/a	n/a
25	MXI1	chr6:32096968-32098671	SK-N-SH	brain:	n/a	n/a
26	MAX	chr6:32096677-32097668	K562	blood:	n/a	n/a
27	HCFC1	chr6:32097235-32098629	Hela-S3	cervix:	n/a	n/a
28	SIN3AK20	chr6:32096868-32097513	K562	blood:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:32097257-32097307	GM12878	blood:	n/a
2	chr6:32097257-32097307	HRE	kidney:	n/a
3	chr6:32097257-32097307	GM19239	blood:	n/a
4	chr6:32097257-32097307	MCF-7	breast:	n/a
5	chr6:32097257-32097307	HCT-116	colon:	n/a
6	chr6:32097257-32097307	CMK	blood:	n/a
7	chr6:32097257-32097307	NB4	blood:	n/a
8	chr6:32097257-32097307	PFSK-1	brain:	n/a
9	chr6:32097257-32097307	H1-hESC	embryonic stem cell:	embryo
10	chr6:32097257-32097307	ovcar-3	ovarian:	n/a
11	chr6:32097257-32097307	HEEpiC	esophagus:	n/a
12	chr6:32097257-32097307	Jurkat	blood:	n/a
13	chr6:32097257-32097307	HRCEpiC	kidney:	n/a
14	chr6:32097257-32097307	GM12891	blood:	n/a
15	chr6:32097257-32097307	AG09309	skin:	n/a
16	chr6:32097257-32097307	HNPCEpiC	eye:	n/a
17	chr6:32097257-32097307	HL-60	blood:	n/a
18	chr6:32097257-32097307	ECC-1	luminal epithelium:	n/a
19	chr6:32097257-32097307	RPTEC	kidney:	n/a
20	chr6:32097257-32097307	AG04449	skin:	fetal
21	chr6:32097257-32097307	T-47D	breast:	n/a
22	chr6:32097257-32097307	HCF	heart:	n/a
23	chr6:32097257-32097307	SAEC	small airway:	n/a
24	chr6:32097257-32097307	U87	brain:	n/a
25	chr6:32097257-32097307	Hepatocyte	liver:	n/a
26	chr6:32097257-32097307	HRPEpiC	eye:	n/a
27	chr6:32097257-32097307	K562	blood:	n/a
28	chr6:32097257-32097307	HUVEC	blood vessel:	n/a
29	chr6:32097257-32097307	PANC-1	pancreas:	n/a
30	chr6:32097257-32097307	AG04450	lung:	fetal
31	chr6:32097257-32097307	AoSMC	blood vessel:	n/a
32	chr6:32097257-32097307	NHDF-neo	bronchial:	n/a
33	chr6:32097257-32097307	SK-N-SH	brain:	n/a
34	chr6:32097257-32097307	LNCaP	prostate:	n/a
35	chr6:32097257-32097307	HepG2	liver:	n/a
36	chr6:32097257-32097307	AG09319	gingival:	n/a
37	chr6:32097257-32097307	PrEC	prostate:	n/a
38	chr6:32097257-32097307	SK-N-SH_RA	brain:	n/a
39	chr6:32097257-32097307	Caco-2	colon:	n/a
40	chr6:32097257-32097307	HCPEpiC	choroid plexus:	n/a
41	chr6:32097257-32097307	A549	lung:	n/a
42	chr6:32097257-32097307	IMR90	lung:	fetal
43	chr6:32097257-32097307	SKMC	muscle:	n/a
44	chr6:32097257-32097307	HEK293	kidney:	embryo
45	chr6:32097257-32097307	HIPEpiC	eye:	n/a
46	chr6:32097257-32097307	NH-A	brain:	n/a
47	chr6:32097257-32097307	BJ	skin:	n/a
48	chr6:32097257-32097307	SK-N-MC	brain:	n/a
49	chr6:32097257-32097307	MCF10A-Er-Src	breast:	n/a
50	chr6:32097257-32097307	AG10803	skin:	n/a

(count:28 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr6:32092992..32099796-chr6:32141629..32147303,15	K562	blood:
2	chr6:32094414..32097298-chr6:32936015..32938565,2	MCF-7	breast:
3	chr6:32092075..32095723-chr6:32095915..32099377,5	K562	blood:
4	chr6:32093127..32099788-chr6:32117635..32125818,23	K562	blood:
5	chr6:32093775..32101330-chr6:32116233..32126080,28	K562	blood:
6	chr6:32094643..32097861-chr6:32156762..32160967,6	MCF-7	breast:
7	chr6:32096172..32100215-chr6:32154777..32158553,5	K562	blood:
8	chr6:32084412..32089013-chr6:32094297..32098521,8	MCF-7	breast:
9	chr6:32096229..32099751-chr6:32142407..32148684,10	K562	blood:
10	chr6:32095298..32098184-chr6:32156498..32160888,5	K562	blood:
11	chr6:32092991..32098157-chr6:32120638..32123369,8	MCF-7	breast:
12	chr6:32093545..32101236-chr6:32120105..32124952,17	MCF-7	breast:
13	chr6:32095195..32097692-chr6:32157646..32160241,2	MCF-7	breast:
14	chr6:32096431..32099984-chr6:32142713..32147644,5	MCF-7	breast:
15	chr6:32094644..32097933-chr6:32160950..32166107,5	MCF-7	breast:
16	chr6:31627130..31628975-chr6:32096561..32099431,2	K562	blood:
17	chr6:32095710..32098039-chr6:32149895..32151933,3	MCF-7	breast:
18	chr6:32096000..32097644-chr6:32134683..32136865,2	K562	blood:
19	chr6:31842997..31845464-chr6:32096305..32098060,2	MCF-7	breast:
20	chr6:32094074..32100900-chr6:32161398..32167888,13	K562	blood:
21	chr6:32093794..32098047-chr6:32142723..32149394,11	MCF-7	breast:
22	chr6:31794064..31796965-chr6:32096080..32097719,2	K562	blood:
23	chr6:32013434..32015953-chr6:32095466..32097702,3	K562	blood:
24	chr6:32095438..32099354-chr6:32131775..32137451,7	K562	blood:
25	chr6:32092056..32098268-chr6:32161262..32166055,9	MCF-7	breast:
26	chr6:31508386..31510621-chr6:32096687..32099353,2	K562	blood:
27	chr6:31794061..31796965-chr6:32094661..32097719,3	K562	blood:
28	chr6:32093849..32103011-chr6:32158588..32167888,20	K562	blood:

No data

Variant related genes	Relation type
ATF6B	TF binding region
ATF6B	CpG island
ENSG00000258388	Chromatin interaction
ENSG00000204305	Chromatin interaction
ENSG00000204257	Chromatin interaction
ENSG00000204304	Chromatin interaction
ENSG00000204439	Chromatin interaction
ENSG00000221988	Chromatin interaction
ENSG00000204388	Chromatin interaction
ENSG00000168477	Chromatin interaction
ENSG00000265236	Chromatin interaction
ENSG00000198563	Chromatin interaction
ENSG00000204385	Chromatin interaction
ENSG00000204310	Chromatin interaction
ENSG00000204301	Chromatin interaction
ENSG00000204308	Chromatin interaction
ENSG00000234006	Chromatin interaction
ENSG00000223837	Chromatin interaction
ENSG00000213676	Chromatin interaction
ENSG00000204314	Chromatin interaction
ENSG00000213654	Chromatin interaction
ENSG00000241404	Chromatin interaction
ENSG00000204256	Chromatin interaction

Extended variants
information (count: 71 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs12153855	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12196385	0.87[ASN][1000 genomes]
rs12198173	0.87[ASN][1000 genomes]
rs12211410	0.87[ASN][1000 genomes]
rs12213851	0.93[AFR][1000 genomes];0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12215107	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13199524	0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs13211318	0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs204884	0.87[ASN][1000 genomes]
rs2077580	0.87[ASN][1000 genomes]
rs2395099	0.92[ASN][1000 genomes]
rs28732174	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28732177	0.84[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs3096689	1.00[ASN][1000 genomes]
rs3096697	1.00[ASN][1000 genomes]
rs3130277	0.95[ASN][1000 genomes]
rs3130281	1.00[ASN][1000 genomes]
rs3130284	1.00[ASN][1000 genomes]
rs3130347	1.00[ASN][1000 genomes]
rs3130348	1.00[ASN][1000 genomes]
rs3131297	1.00[ASN][1000 genomes]
rs3132965	1.00[ASN][1000 genomes]
rs3134608	1.00[ASN][1000 genomes]
rs3134941	0.91[ASN][1000 genomes]
rs3134944	1.00[ASN][1000 genomes]
rs3134945	1.00[ASN][1000 genomes]
rs3134946	1.00[ASN][1000 genomes]
rs3134947	1.00[ASN][1000 genomes]
rs3134949	0.81[ASN][1000 genomes]
rs3134951	1.00[ASN][1000 genomes]
rs3134952	1.00[ASN][1000 genomes]
rs34214527	0.83[ASN][1000 genomes]
rs6904786	0.85[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:38 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1017945	chr6:31609641-32481240	Genic enhancers Weak transcription Transcr. at gene 5' and 3' Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	322 gene(s)	inside rSNPs	diseases
2	nsv601950	chr6:31785438-32492308	Enhancers Bivalent Enhancer Active TSS Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	197 gene(s)	inside rSNPs	diseases
3	nsv601951	chr6:31785438-32496748	Enhancers Flanking Active TSS Strong transcription Weak transcription Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	197 gene(s)	inside rSNPs	diseases
4	nsv601955	chr6:31785453-32484368	Genic enhancers Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	196 gene(s)	inside rSNPs	diseases
5	nsv601956	chr6:31785453-32492308	Strong transcription Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	197 gene(s)	inside rSNPs	diseases
6	nsv601961	chr6:31868322-32484368	Enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	126 gene(s)	inside rSNPs	diseases
7	esv2758043	chr6:31871512-32209113	Genic enhancers Enhancers Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	114 gene(s)	inside rSNPs	diseases
8	esv2759415	chr6:31871512-32209113	Flanking Active TSS Enhancers Active TSS Weak transcription Strong transcription Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	114 gene(s)	inside rSNPs	diseases
9	nsv601972	chr6:31947594-32484368	Enhancers Genic enhancers Strong transcription Flanking Active TSS Active TSS Weak transcription Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	91 gene(s)	inside rSNPs	diseases
10	nsv601975	chr6:31949352-32484368	Enhancers Bivalent Enhancer Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Genic enhancers Weak transcription Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
11	nsv601976	chr6:31949352-32508887	Weak transcription Active TSS Bivalent Enhancer Enhancers Genic enhancers Strong transcription Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	93 gene(s)	inside rSNPs	diseases
12	nsv601977	chr6:31949352-32651056	Bivalent Enhancer Flanking Active TSS Genic enhancers Enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	100 gene(s)	inside rSNPs	diseases
13	nsv601980	chr6:31950266-32484368	Enhancers Weak transcription Genic enhancers Active TSS Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
14	nsv601982	chr6:31951207-32484368	Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Active TSS Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
15	nsv601983	chr6:31951367-32484368	Enhancers Strong transcription Flanking Active TSS Weak transcription Genic enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
16	nsv601984	chr6:31951912-32484368	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
17	nsv601999	chr6:31952422-32484368	Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription Strong transcription Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
18	nsv602000	chr6:31952422-32552416	Genic enhancers Flanking Bivalent TSS/Enh Active TSS Enhancers Weak transcription Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	96 gene(s)	inside rSNPs	diseases
19	nsv602015	chr6:31953467-32481507	Enhancers Weak transcription Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
20	nsv602016	chr6:31953467-32484368	Weak transcription Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
21	nsv602017	chr6:31953467-32505730	Strong transcription Active TSS Flanking Active TSS Weak transcription Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	93 gene(s)	inside rSNPs	diseases
22	nsv602018	chr6:31953467-32509985	Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	93 gene(s)	inside rSNPs	diseases
23	nsv602019	chr6:31953467-32779803	Transcr. at gene 5' and 3' Active TSS Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	109 gene(s)	inside rSNPs	diseases
24	nsv602029	chr6:31955572-32484368	Active TSS Flanking Active TSS Enhancers Weak transcription Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
25	nsv602035	chr6:31959480-32484368	Bivalent Enhancer Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
26	nsv602036	chr6:31959878-32484368	Weak transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Enhancers Strong transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
27	nsv602052	chr6:31972034-32481507	Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Weak transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	89 gene(s)	inside rSNPs	diseases
28	nsv602053	chr6:31972034-32484368	Active TSS Strong transcription Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	89 gene(s)	inside rSNPs	diseases
29	nsv602054	chr6:31972034-32779803	Enhancers Active TSS Strong transcription Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	108 gene(s)	inside rSNPs	diseases
30	nsv602086	chr6:31986320-32484368	Enhancers Active TSS Genic enhancers Weak transcription Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	84 gene(s)	inside rSNPs	diseases
31	nsv1024599	chr6:32007556-32481240	Weak transcription Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	82 gene(s)	inside rSNPs	diseases
32	nsv830629	chr6:32043978-32189787	Flanking Active TSS Weak transcription Strong transcription Bivalent Enhancer Enhancers Bivalent/Poised TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	69 gene(s)	inside rSNPs	diseases
33	nsv1033939	chr6:32048657-32196256	Enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	69 gene(s)	inside rSNPs	diseases
34	nsv462876	chr6:32064726-32171683	Strong transcription Genic enhancers Enhancers Flanking Active TSS Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	67 gene(s)	inside rSNPs	diseases
35	nsv602104	chr6:32064726-32171683	Flanking Active TSS Enhancers Weak transcription Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	67 gene(s)	inside rSNPs	diseases
36	nsv1028506	chr6:32073612-32107531	Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Active TSS Strong transcription Genic enhancers Enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
37	nsv884701	chr6:32089549-32130329	Flanking Active TSS Genic enhancers Strong transcription Enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases
38	nsv884702	chr6:32094312-32108367	Strong transcription Weak transcription Enhancers Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:32094800-32098800	Active TSS	HUES64 Cell Line	embryonic stem cell
2	chr6:32095200-32098800	Active TSS	iPS-20b Cell Line	embryonic stem cell
3	chr6:32096000-32097400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
4	chr6:32096000-32097400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
5	chr6:32096000-32097400	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
6	chr6:32096000-32097800	Enhancers	Spleen	Spleen
7	chr6:32096200-32097400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
8	chr6:32096200-32097400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
9	chr6:32096200-32097400	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr6:32096200-32097400	Enhancers	Primary monocytes fromperipheralblood	blood
11	chr6:32096200-32097400	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
12	chr6:32096200-32097400	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
13	chr6:32096200-32097400	Flanking Active TSS	Esophagus	oesophagus
14	chr6:32096200-32097400	Flanking Active TSS	Pancreas	Pancrea
15	chr6:32096200-32097400	Flanking Active TSS	A549	lung
16	chr6:32096200-32097400	Flanking Active TSS	HepG2	liver
17	chr6:32096200-32097600	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
18	chr6:32096200-32097600	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
19	chr6:32096200-32097600	Flanking Active TSS	Brain Angular Gyrus	brain
20	chr6:32096200-32097600	Flanking Active TSS	Brain Anterior Caudate	brain
21	chr6:32096200-32097600	Flanking Active TSS	Brain Germinal Matrix	brain
22	chr6:32096200-32097600	Flanking Active TSS	Brain Substantia Nigra	brain
23	chr6:32096200-32097600	Flanking Active TSS	Colon Smooth Muscle	Colon
24	chr6:32096200-32097600	Flanking Active TSS	Rectal Mucosa Donor 31	rectum
25	chr6:32096200-32097600	Flanking Active TSS	Dnd41	blood
26	chr6:32096200-32097600	Flanking Active TSS	GM12878-XiMat	blood
27	chr6:32096200-32097600	Flanking Active TSS	HMEC	breast
28	chr6:32096200-32097600	Flanking Active TSS	HSMM	muscle
29	chr6:32096200-32097600	Flanking Active TSS	NHEK	skin
30	chr6:32096200-32097800	Flanking Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
31	chr6:32096200-32097800	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
32	chr6:32096200-32097800	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
33	chr6:32096200-32097800	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
34	chr6:32096200-32097800	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
35	chr6:32096200-32097800	Flanking Active TSS	Muscle Satellite Cultured Cells	--
36	chr6:32096200-32097800	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
37	chr6:32096200-32097800	Flanking Active TSS	Adipose Nuclei	Adipose
38	chr6:32096200-32097800	Flanking Active TSS	Brain Cingulate Gyrus	brain
39	chr6:32096200-32097800	Flanking Active TSS	Brain Hippocampus Middle	brain
40	chr6:32096200-32097800	Flanking Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
41	chr6:32096200-32097800	Flanking Active TSS	Duodenum Mucosa	Duodenum
42	chr6:32096200-32097800	Flanking Active TSS	Duodenum Smooth Muscle	Duodenum
43	chr6:32096200-32097800	Flanking Active TSS	Fetal Brain Female	brain
44	chr6:32096200-32097800	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
45	chr6:32096200-32097800	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
46	chr6:32096200-32097800	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
47	chr6:32096200-32097800	Flanking Active TSS	Stomach Smooth Muscle	stomach
48	chr6:32096200-32097800	Flanking Active TSS	Hela-S3	cervix
49	chr6:32096200-32098000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
50	chr6:32096400-32097400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung

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