Variant report

Variant rs1800625
Chromosome Location chr6:32152442-32152443
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:32146800-32156600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr6:32147200-32156400 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr6:32147400-32153800 Weak transcription Fetal Kidney kidney
4 chr6:32147400-32153800 Weak transcription HUVEC blood vessel
5 chr6:32147400-32154400 Weak transcription NHDF-Ad bronchial
6 chr6:32147600-32152600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr6:32147600-32153200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr6:32147600-32155000 Genic enhancers Primary T helper cells PMA-I stimulated --
9 chr6:32147600-32155000 Weak transcription Brain Substantia Nigra brain
10 chr6:32147600-32156200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr6:32147600-32156200 Genic enhancers Primary T cells fromperipheralblood blood
12 chr6:32147800-32152600 Strong transcription Thymus Thymus
13 chr6:32148000-32152600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
14 chr6:32148000-32152800 Strong transcription Primary B cells from peripheral blood blood
15 chr6:32148000-32153800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr6:32148200-32153400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
17 chr6:32148200-32154600 Weak transcription Small Intestine intestine
18 chr6:32148800-32153400 Weak transcription Fetal Brain Male brain
19 chr6:32149400-32152600 Strong transcription Sigmoid Colon Sigmoid Colon
20 chr6:32149400-32153200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr6:32149400-32153400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr6:32149400-32153800 Weak transcription iPS-18 Cell Line embryonic stem cell
23 chr6:32149400-32153800 Weak transcription HSMMtube muscle
24 chr6:32149400-32154200 Weak transcription Brain Angular Gyrus brain
25 chr6:32149400-32154400 Weak transcription Pancreas Pancrea
26 chr6:32149400-32154800 Weak transcription Aorta Aorta
27 chr6:32149800-32152600 Strong transcription Duodenum Mucosa Duodenum
28 chr6:32149800-32156600 Weak transcription Stomach Mucosa stomach
29 chr6:32150200-32156200 Genic enhancers Primary T helper 17 cells PMA-I stimulated --
30 chr6:32150400-32153800 Weak transcription Right Atrium heart
31 chr6:32150600-32152600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
32 chr6:32150600-32152600 Strong transcription Fetal Thymus thymus
33 chr6:32150600-32153800 Weak transcription NHEK skin
34 chr6:32150800-32155000 Weak transcription iPS-15b Cell Line embryonic stem cell
35 chr6:32151000-32153400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
36 chr6:32151000-32153800 Weak transcription Fetal Brain Female brain
37 chr6:32151000-32154400 Weak transcription Primary T killer naive cells fromperipheralblood blood
38 chr6:32151000-32156400 Weak transcription Ovary ovary
39 chr6:32151200-32152800 Weak transcription HMEC breast
40 chr6:32151200-32153400 Weak transcription NH-A brain
41 chr6:32151200-32153800 Weak transcription Fetal Lung lung
42 chr6:32151400-32152600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
43 chr6:32151400-32155800 Weak transcription HSMM muscle
44 chr6:32151600-32153800 Weak transcription Muscle Satellite Cultured Cells --
45 chr6:32151600-32153800 Weak transcription Rectal Smooth Muscle rectum
46 chr6:32151600-32154000 Weak transcription Liver Liver
47 chr6:32151600-32154000 Weak transcription Psoas Muscle Psoas
48 chr6:32151600-32154200 Weak transcription Brain Inferior Temporal Lobe brain
49 chr6:32151600-32154200 Weak transcription Rectal Mucosa Donor 31 rectum
50 chr6:32151800-32153400 Weak transcription HUES64 Cell Line embryonic stem cell

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