Variant report

Variant	rs3131300
Chromosome Location	chr6:32151934-32151935
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:84)
CpG islands
(count:0)
Chromatin interactive
region (count:2)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:84 , 50 per page) page: 1 2

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr6:32151909-32152094	A549	lung:	n/a	n/a
2	POLR2A	chr6:32148567-32159227	K562	blood:	n/a	n/a
3	POLR2A	chr6:32151280-32152418	GM12878	blood:	n/a	n/a
4	POLR2A	chr6:32151200-32152425	GM12891	blood:	n/a	n/a
5	POLR2A	chr6:32151905-32152082	A549	lung:	n/a	n/a
6	PBX3	chr6:32151512-32152282	SK-N-SH	brain:	n/a	n/a
7	POLR2A	chr6:32149799-32156528	K562	blood:	n/a	n/a
8	POLR2A	chr6:32151743-32152376	GM18951	blood:	n/a	n/a
9	POLR2A	chr6:32151777-32152128	Raji	blood:	n/a	n/a
10	MTA3	chr6:32150851-32152460	GM12878	blood:	n/a	n/a
11	POLR2A	chr6:32151811-32152464	HUVEC	blood vessel:	n/a	n/a
12	POLR2A	chr6:32151615-32152414	Hela-S3	cervix:	n/a	n/a
13	STAT5A	chr6:32151800-32152128	GM12878	blood:	n/a	n/a
14	MTA3	chr6:32151662-32151978	GM12878	blood:	n/a	n/a
15	POLR2A	chr6:32150775-32152429	K562	blood:	n/a	n/a
16	HEY1	chr6:32151731-32152387	HepG2	liver:	n/a	n/a
17	POLR2A	chr6:32150720-32152483	MCF10A-Er-Src	breast:	n/a	n/a
18	ELF1	chr6:32151339-32152131	GM12878	blood:	n/a	n/a
19	POLR2A	chr6:32151810-32152498	PANC-1	pancreas:	n/a	n/a
20	POLR2A	chr6:32151375-32152496	SK-N-SH	brain:	n/a	n/a
21	POLR2A	chr6:32151651-32152437	HCT-116	colon:	n/a	n/a
22	NFATC1	chr6:32151580-32152281	GM12878	blood:	n/a	n/a
23	STAT5A	chr6:32151512-32152580	GM12878	blood:	n/a	n/a
24	POLR2A	chr6:32151576-32152497	HCT-116	colon:	n/a	n/a
25	POLR2A	chr6:32149716-32152481	K562	blood:	n/a	n/a
26	POLR2A	chr6:32151539-32152489	K562	blood:	n/a	n/a
27	POLR2A	chr6:32151270-32152332	HUVEC	blood vessel:	n/a	n/a
28	POLR2A	chr6:32149720-32152522	K562	blood:	n/a	n/a
29	POLR2A	chr6:32151681-32152103	H1-hESC	embryonic stem cell:	n/a	n/a
30	POLR2A	chr6:32151619-32152149	GM19099	blood:	n/a	n/a
31	POLR2A	chr6:32151459-32152388	GM12892	blood:	n/a	n/a
32	POLR2A	chr6:32151925-32151961	MCF-7	breast:	n/a	n/a
33	POLR2A	chr6:32151205-32152392	GM12891	blood:	n/a	n/a
34	POLR2A	chr6:32151474-32152260	HUVEC	blood vessel:	n/a	n/a
35	POLR2A	chr6:32151520-32152503	PANC-1	pancreas:	n/a	n/a
36	POLR2A	chr6:32150924-32152877	PFSK-1	brain:	n/a	n/a
37	POLR2A	chr6:32148457-32153127	SK-N-MC	brain:	n/a	n/a
38	POLR2A	chr6:32151894-32152145	H1-hESC	embryonic stem cell:	n/a	n/a
39	POLR2A	chr6:32149718-32152526	HepG2	liver:	n/a	n/a
40	POLR2A	chr6:32151180-32152460	HL-60	blood:	n/a	n/a
41	POLR2A	chr6:32151868-32152122	ProgFib	skin:	n/a	n/a
42	POLR2A	chr6:32150751-32152490	MCF10A-Er-Src	breast:	n/a	n/a
43	POLR2A	chr6:32151250-32152235	HepG2	liver:	n/a	n/a
44	POLR2A	chr6:32151916-32152194	SK-N-SH	brain:	n/a	n/a
45	POLR2A	chr6:32151508-32152406	HepG2	liver:	n/a	n/a
46	TEAD4	chr6:32151908-32152292	K562	blood:	n/a	n/a
47	POLR2A	chr6:32151629-32152331	GM15510	blood:	n/a	n/a
48	POLR2A	chr6:32151917-32152149	HUVEC	blood vessel:	n/a	n/a
49	POLR2A	chr6:32151296-32152393	PBDE	blood:	n/a	n/a
50	POLR2A	chr6:32151307-32152420	GM12878	blood:	n/a	n/a

No data

(count:2 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:32094938..32096983-chr6:32150863..32152570,2	MCF-7	breast:
2	chr6:31863494..31865862-chr6:32150158..32153094,2	K562	blood:

No data

Variant related genes	Relation type
AGER	TF binding region
ENSG00000166278	Chromatin interaction
ENSG00000213676	Chromatin interaction
ENSG00000204371	Chromatin interaction

Extended variants
information (count: 51 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs1062070	0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1800625	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2395099	0.81[EUR][1000 genomes]
rs3096697	0.82[EUR][1000 genomes]
rs3130281	0.81[EUR][1000 genomes]
rs3130284	0.82[EUR][1000 genomes]
rs3130347	0.82[EUR][1000 genomes]
rs3130348	0.82[EUR][1000 genomes]
rs3130349	0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3131297	0.81[EUR][1000 genomes]
rs3134606	0.82[EUR][1000 genomes]
rs3134940	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3134941	0.92[AFR][1000 genomes];0.99[EUR][1000 genomes]
rs3134949	0.82[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:37 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1017945	chr6:31609641-32481240	Genic enhancers Weak transcription Transcr. at gene 5' and 3' Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	322 gene(s)	inside rSNPs	diseases
2	nsv601950	chr6:31785438-32492308	Enhancers Bivalent Enhancer Active TSS Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	197 gene(s)	inside rSNPs	diseases
3	nsv601951	chr6:31785438-32496748	Enhancers Flanking Active TSS Strong transcription Weak transcription Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	197 gene(s)	inside rSNPs	diseases
4	nsv601955	chr6:31785453-32484368	Genic enhancers Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	196 gene(s)	inside rSNPs	diseases
5	nsv601956	chr6:31785453-32492308	Strong transcription Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	197 gene(s)	inside rSNPs	diseases
6	nsv601961	chr6:31868322-32484368	Enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	126 gene(s)	inside rSNPs	diseases
7	esv2758043	chr6:31871512-32209113	Genic enhancers Enhancers Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	114 gene(s)	inside rSNPs	diseases
8	esv2759415	chr6:31871512-32209113	Flanking Active TSS Enhancers Active TSS Weak transcription Strong transcription Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	114 gene(s)	inside rSNPs	diseases
9	nsv601972	chr6:31947594-32484368	Enhancers Genic enhancers Strong transcription Flanking Active TSS Active TSS Weak transcription Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	91 gene(s)	inside rSNPs	diseases
10	nsv601975	chr6:31949352-32484368	Enhancers Bivalent Enhancer Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Genic enhancers Weak transcription Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
11	nsv601976	chr6:31949352-32508887	Weak transcription Active TSS Bivalent Enhancer Enhancers Genic enhancers Strong transcription Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	93 gene(s)	inside rSNPs	diseases
12	nsv601977	chr6:31949352-32651056	Bivalent Enhancer Flanking Active TSS Genic enhancers Enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	100 gene(s)	inside rSNPs	diseases
13	nsv601980	chr6:31950266-32484368	Enhancers Weak transcription Genic enhancers Active TSS Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
14	nsv601982	chr6:31951207-32484368	Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Active TSS Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
15	nsv601983	chr6:31951367-32484368	Enhancers Strong transcription Flanking Active TSS Weak transcription Genic enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
16	nsv601984	chr6:31951912-32484368	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
17	nsv601999	chr6:31952422-32484368	Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription Strong transcription Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
18	nsv602000	chr6:31952422-32552416	Genic enhancers Flanking Bivalent TSS/Enh Active TSS Enhancers Weak transcription Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	96 gene(s)	inside rSNPs	diseases
19	nsv602015	chr6:31953467-32481507	Enhancers Weak transcription Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
20	nsv602016	chr6:31953467-32484368	Weak transcription Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
21	nsv602017	chr6:31953467-32505730	Strong transcription Active TSS Flanking Active TSS Weak transcription Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	93 gene(s)	inside rSNPs	diseases
22	nsv602018	chr6:31953467-32509985	Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	93 gene(s)	inside rSNPs	diseases
23	nsv602019	chr6:31953467-32779803	Transcr. at gene 5' and 3' Active TSS Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	109 gene(s)	inside rSNPs	diseases
24	nsv602029	chr6:31955572-32484368	Active TSS Flanking Active TSS Enhancers Weak transcription Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
25	nsv602035	chr6:31959480-32484368	Bivalent Enhancer Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
26	nsv602036	chr6:31959878-32484368	Weak transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Enhancers Strong transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
27	nsv602052	chr6:31972034-32481507	Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Weak transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	89 gene(s)	inside rSNPs	diseases
28	nsv602053	chr6:31972034-32484368	Active TSS Strong transcription Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	89 gene(s)	inside rSNPs	diseases
29	nsv602054	chr6:31972034-32779803	Enhancers Active TSS Strong transcription Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	108 gene(s)	inside rSNPs	diseases
30	nsv602086	chr6:31986320-32484368	Enhancers Active TSS Genic enhancers Weak transcription Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	84 gene(s)	inside rSNPs	diseases
31	nsv1024599	chr6:32007556-32481240	Weak transcription Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	82 gene(s)	inside rSNPs	diseases
32	nsv830629	chr6:32043978-32189787	Flanking Active TSS Weak transcription Strong transcription Bivalent Enhancer Enhancers Bivalent/Poised TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	69 gene(s)	inside rSNPs	diseases
33	nsv1033939	chr6:32048657-32196256	Enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	69 gene(s)	inside rSNPs	diseases
34	nsv462876	chr6:32064726-32171683	Strong transcription Genic enhancers Enhancers Flanking Active TSS Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	67 gene(s)	inside rSNPs	diseases
35	nsv602104	chr6:32064726-32171683	Flanking Active TSS Enhancers Weak transcription Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	67 gene(s)	inside rSNPs	diseases
36	nsv462877	chr6:32151443-32177900	Active TSS Genic enhancers Weak transcription Enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	48 gene(s)	inside rSNPs	diseases
37	nsv602105	chr6:32151443-32177900	Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Active TSS Genic enhancers Weak transcription Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	48 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:32146800-32156600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr6:32147000-32152000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
3	chr6:32147000-32152400	Genic enhancers	Fetal Adrenal Gland	Adrenal Gland
4	chr6:32147200-32152000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
5	chr6:32147200-32152400	Genic enhancers	Primary T helper cells fromperipheralblood	blood
6	chr6:32147200-32156400	Weak transcription	Pancreatic Islets	Pancreatic Islet
7	chr6:32147400-32152000	Strong transcription	HUES6 Cell Line	embryonic stem cell
8	chr6:32147400-32152000	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
9	chr6:32147400-32153800	Weak transcription	Fetal Kidney	kidney
10	chr6:32147400-32153800	Weak transcription	HUVEC	blood vessel
11	chr6:32147400-32154400	Weak transcription	NHDF-Ad	bronchial
12	chr6:32147600-32152000	Strong transcription	iPS-20b Cell Line	embryonic stem cell
13	chr6:32147600-32152200	Genic enhancers	Right Ventricle	heart
14	chr6:32147600-32152400	Strong transcription	Brain Cingulate Gyrus	brain
15	chr6:32147600-32152400	Strong transcription	Osteobl	bone
16	chr6:32147600-32152600	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
17	chr6:32147600-32153200	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
18	chr6:32147600-32155000	Genic enhancers	Primary T helper cells PMA-I stimulated	--
19	chr6:32147600-32155000	Weak transcription	Brain Substantia Nigra	brain
20	chr6:32147600-32156200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
21	chr6:32147600-32156200	Genic enhancers	Primary T cells fromperipheralblood	blood
22	chr6:32147800-32152200	Strong transcription	Rectal Mucosa Donor 29	rectum
23	chr6:32147800-32152400	Strong transcription	Cortex derived primary cultured neurospheres	brain
24	chr6:32147800-32152400	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
25	chr6:32147800-32152400	Genic enhancers	Lung	lung
26	chr6:32147800-32152600	Strong transcription	Thymus	Thymus
27	chr6:32148000-32152000	Strong transcription	HepG2	liver
28	chr6:32148000-32152200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
29	chr6:32148000-32152200	Strong transcription	Colonic Mucosa	Colon
30	chr6:32148000-32152400	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
31	chr6:32148000-32152400	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
32	chr6:32148000-32152400	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
33	chr6:32148000-32152600	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
34	chr6:32148000-32152800	Strong transcription	Primary B cells from peripheral blood	blood
35	chr6:32148000-32153800	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
36	chr6:32148200-32153400	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
37	chr6:32148200-32154600	Weak transcription	Small Intestine	intestine
38	chr6:32148400-32152200	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
39	chr6:32148400-32152400	Strong transcription	Primary neutrophils fromperipheralblood	blood
40	chr6:32148600-32152000	Strong transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
41	chr6:32148600-32152400	Strong transcription	Primary B cells from cord blood	blood
42	chr6:32148600-32152400	Strong transcription	Primary T cells from cord blood	blood
43	chr6:32148600-32152400	Strong transcription	Brain Hippocampus Middle	brain
44	chr6:32148800-32152400	Strong transcription	Primary hematopoietic stem cells	blood
45	chr6:32148800-32152400	Strong transcription	NHLF	lung
46	chr6:32148800-32153400	Weak transcription	Fetal Brain Male	brain
47	chr6:32149000-32152200	Strong transcription	Breast Myoepithelial Primary Cells	Breast
48	chr6:32149000-32152400	Genic enhancers	Spleen	Spleen
49	chr6:32149400-32152000	Weak transcription	Fetal Heart	heart
50	chr6:32149400-32152200	Strong transcription	Esophagus	oesophagus

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links