The 2.0 version of rSNPBase

Variant report

Variant rs35489949
Chromosome Location chr1:86897261-86897262
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:16 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:86890600-86903000 Weak transcription Esophagus oesophagus
2 chr1:86894200-86897400 Enhancers Primary hematopoietic stem cells short term culture blood
3 chr1:86894400-86900200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr1:86895000-86898800 Weak transcription Spleen Spleen
5 chr1:86896400-86901800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr1:86896600-86897400 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr1:86896600-86897400 Enhancers Fetal Lung lung
8 chr1:86896600-86897400 Genic enhancers NHEK skin
9 chr1:86896600-86897600 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr1:86896600-86901800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr1:86896600-86902600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
12 chr1:86896600-86914400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
13 chr1:86897000-86900200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr1:86897200-86898800 Weak transcription NHDF-Ad bronchial
15 chr1:86897200-86922600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr1:86897200-86922800 Strong transcription HMEC breast

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015