Variant report

Variant	rs35525341
Chromosome Location	chr11:119664893-119664894
allele	A/C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr11:119660449..119662688-chr11:119663958..119666461,2	K562	blood:
2	chr11:119663785..119666002-chr11:119674482..119676269,2	MCF-7	breast:
3	chr11:119663136..119665675-chr11:119667575..119669290,2	K562	blood:

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs10892466	0.80[EUR][1000 genomes]
rs7935678	0.81[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1837528	chr11:119659918-119666352	Weak transcription Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Bivalent/Poised TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:119660800-119665400	Weak transcription	Esophagus	oesophagus
2	chr11:119661600-119665600	Enhancers	NH-A	brain
3	chr11:119661600-119666600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr11:119662000-119665000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr11:119662600-119668400	Weak transcription	Brain Inferior Temporal Lobe	brain
6	chr11:119662800-119665000	Enhancers	NHDF-Ad	bronchial
7	chr11:119662800-119665400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
8	chr11:119662800-119665800	Weak transcription	Fetal Brain Male	brain
9	chr11:119662800-119667000	Weak transcription	Fetal Brain Female	brain
10	chr11:119662800-119667400	Weak transcription	Fetal Lung	lung
11	chr11:119662800-119667800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
12	chr11:119663000-119665600	Weak transcription	Brain Angular Gyrus	brain
13	chr11:119663400-119665200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
14	chr11:119663400-119669000	Bivalent Enhancer	H1 Cell Line	embryonic stem cell
15	chr11:119663800-119665600	Weak transcription	Brain Germinal Matrix	brain
16	chr11:119663800-119666600	Bivalent Enhancer	ES-I3 Cell Line	embryonic stem cell
17	chr11:119664200-119665800	Bivalent Enhancer	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
18	chr11:119664200-119665800	Bivalent Enhancer	HUES6 Cell Line	embryonic stem cell
19	chr11:119664200-119666200	Bivalent Enhancer	ES-WA7 Cell Line	embryonic stem cell
20	chr11:119664400-119665400	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
21	chr11:119664600-119665600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
22	chr11:119664600-119665600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
23	chr11:119664600-119665600	Weak transcription	Osteobl	bone
24	chr11:119664600-119666000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell

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