Variant report

Variant	rs35566124
Chromosome Location	chr1:159435699-159435700
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs11265192	1.00[EUR][1000 genomes]
rs12732651	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17422193	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs34182990	1.00[AMR][1000 genomes]
rs34530697	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs34657392	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs34716133	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs35214585	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs35634161	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35764077	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs35878335	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4506456	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs71632665	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs71632669	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs71632670	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3334702	chr1:159415928-159442349	Enhancers Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv432975	chr1:159431927-159461927	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:159435200-159438400	Active TSS	Liver	Liver

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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