The 2.0 version of rSNPBase

Variant report

Variant rs35664643
Chromosome Location chr22:30039879-30039880
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:30014400-30085800 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr22:30018000-30069200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr22:30020200-30057000 Weak transcription Psoas Muscle Psoas
4 chr22:30020200-30064200 Weak transcription Small Intestine intestine
5 chr22:30020800-30097000 Weak transcription Stomach Mucosa stomach
6 chr22:30021800-30041600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
7 chr22:30022200-30053400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr22:30026800-30055800 Weak transcription Gastric stomach
9 chr22:30027200-30044400 Weak transcription Brain Substantia Nigra brain
10 chr22:30027600-30057200 Weak transcription Brain Hippocampus Middle brain
11 chr22:30027800-30056000 Weak transcription Primary T killer naive cells fromperipheralblood blood
12 chr22:30028400-30044400 Weak transcription Pancreas Pancrea
13 chr22:30029600-30053800 Weak transcription Esophagus oesophagus
14 chr22:30032200-30047000 Weak transcription iPS-15b Cell Line embryonic stem cell
15 chr22:30032200-30057000 Weak transcription Colonic Mucosa Colon
16 chr22:30032200-30070000 Weak transcription Fetal Brain Male brain
17 chr22:30033000-30053800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr22:30034200-30040800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
19 chr22:30034400-30060400 Weak transcription K562 blood
20 chr22:30035400-30047400 Weak transcription iPS-18 Cell Line embryonic stem cell
21 chr22:30035400-30060800 Weak transcription Primary T helper naive cells from peripheral blood blood
22 chr22:30035600-30057200 Weak transcription Placenta Placenta
23 chr22:30036600-30052000 Weak transcription Brain Anterior Caudate brain
24 chr22:30036800-30041000 Weak transcription Primary T helper naive cells fromperipheralblood blood
25 chr22:30036800-30053000 Weak transcription Cortex derived primary cultured neurospheres brain
26 chr22:30037200-30064200 Weak transcription H9 Cell Line embryonic stem cell
27 chr22:30037600-30041200 Weak transcription NHDF-Ad bronchial
28 chr22:30037600-30047800 Weak transcription Primary neutrophils fromperipheralblood blood
29 chr22:30038000-30041000 Weak transcription Muscle Satellite Cultured Cells --
30 chr22:30038200-30041000 Weak transcription Primary B cells from cord blood blood
31 chr22:30038200-30057000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
32 chr22:30038400-30043600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
33 chr22:30038400-30044400 Weak transcription Thymus Thymus
34 chr22:30038400-30055800 Weak transcription Fetal Kidney kidney
35 chr22:30038400-30060600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr22:30038800-30057000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
37 chr22:30038800-30069800 Weak transcription Pancreatic Islets Pancreatic Islet
38 chr22:30039000-30040000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr22:30039000-30040800 Weak transcription Breast Myoepithelial Primary Cells Breast
40 chr22:30039000-30041000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr22:30039000-30041000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr22:30039000-30041000 Weak transcription Primary T helper cells PMA-I stimulated --
43 chr22:30039000-30041000 Weak transcription Primary T helper cells fromperipheralblood blood
44 chr22:30039000-30041000 Weak transcription Rectal Mucosa Donor 31 rectum
45 chr22:30039000-30041200 Weak transcription iPS-20b Cell Line embryonic stem cell
46 chr22:30039000-30041200 Weak transcription Primary hematopoietic stem cells blood
47 chr22:30039000-30041200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
48 chr22:30039000-30041200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
49 chr22:30039000-30041200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
50 chr22:30039000-30041200 Weak transcription Brain Cingulate Gyrus brain

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Last update: Aug 31, 2015