Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs1427945	0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1427953	0.89[EUR][1000 genomes]
rs1560048	0.81[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs16870132	0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs34151557	0.87[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs34665168	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34846998	1.00[EUR][1000 genomes]
rs34995238	1.00[EUR][1000 genomes]
rs35151547	0.82[EUR][1000 genomes]
rs35273547	1.00[EUR][1000 genomes]
rs35438038	0.89[EUR][1000 genomes]
rs35884360	0.89[EUR][1000 genomes]
rs36085805	0.89[EUR][1000 genomes]
rs6452973	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6891046	0.89[EUR][1000 genomes]
rs71637358	0.94[EUR][1000 genomes]
rs71637361	0.94[EUR][1000 genomes]
rs71637362	0.82[EUR][1000 genomes]
rs73143247	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7722500	1.00[EUR][1000 genomes]
rs7722750	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv882370	chr5:90986181-91287437	Enhancers Bivalent Enhancer Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv882372	chr5:91018052-91221647	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	nsv1017504	chr5:91092920-91178854	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	n/a
4	nsv830396	chr5:91121355-91343236	Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:91134000-91137600	Enhancers	Fetal Brain Male	brain
2	chr5:91136000-91137600	Enhancers	ES-I3 Cell Line	embryonic stem cell
3	chr5:91136200-91138200	Enhancers	HUES48 Cell Line	embryonic stem cell
4	chr5:91136200-91138200	Enhancers	iPS-18 Cell Line	embryonic stem cell
5	chr5:91136400-91137600	Enhancers	iPS-15b Cell Line	embryonic stem cell
6	chr5:91136400-91138200	Enhancers	HUES64 Cell Line	embryonic stem cell
7	chr5:91136600-91137400	Enhancers	iPS-20b Cell Line	embryonic stem cell
8	chr5:91136600-91137600	Enhancers	HUES6 Cell Line	embryonic stem cell
9	chr5:91136600-91138000	Enhancers	Fetal Heart	heart

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