Variant report

Variant	rs35969824
Chromosome Location	chr12:33095701-33095702
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 32 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs1032702	0.90[EUR][1000 genomes]
rs1032703	0.90[EUR][1000 genomes]
rs1032704	0.90[EUR][1000 genomes]
rs10844411	0.91[EUR][1000 genomes]
rs10844428	0.83[EUR][1000 genomes]
rs11052390	0.85[AFR][1000 genomes];0.82[EUR][1000 genomes]
rs11608737	0.80[EUR][1000 genomes]
rs1353934	0.86[EUR][1000 genomes]
rs1353935	0.88[EUR][1000 genomes]
rs1500073	0.87[EUR][1000 genomes]
rs1909610	0.89[EUR][1000 genomes]
rs1909611	0.89[EUR][1000 genomes]
rs4318054	0.95[EUR][1000 genomes]
rs4931672	0.90[EUR][1000 genomes]
rs4931675	0.90[EUR][1000 genomes]
rs6488115	0.94[EUR][1000 genomes]
rs7295724	0.83[EUR][1000 genomes]
rs7305797	0.82[EUR][1000 genomes]
rs7305861	0.87[EUR][1000 genomes]
rs7306057	0.88[EUR][1000 genomes]
rs7306202	0.82[EUR][1000 genomes]
rs7315188	0.86[EUR][1000 genomes]
rs7977438	0.87[EUR][1000 genomes]
rs7977579	0.88[EUR][1000 genomes]
rs904640	0.88[EUR][1000 genomes]
rs9738114	0.87[EUR][1000 genomes]
rs9739928	0.87[EUR][1000 genomes]
rs985876	0.88[EUR][1000 genomes]
rs985877	0.88[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530421	chr12:32825335-33465991	Strong transcription Weak transcription Genic enhancers Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
2	nsv1054440	chr12:32872999-33150460	Flanking Active TSS Weak transcription Active TSS Enhancers Strong transcription Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
3	nsv832367	chr12:33063644-33298967	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:33095400-33097000	Enhancers	Placenta	Placenta

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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