The 2.0 version of rSNPBase

Variant report

Variant rs36110608
Chromosome Location chr1:85852936-85852937
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:29 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:85839800-85864200 Weak transcription Aorta Aorta
2 chr1:85841200-85859800 Weak transcription NH-A brain
3 chr1:85845000-85870000 Weak transcription HSMMtube muscle
4 chr1:85845800-85859800 Weak transcription NHLF lung
5 chr1:85849200-85853000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
6 chr1:85849400-85861600 Weak transcription Muscle Satellite Cultured Cells --
7 chr1:85849400-85863400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr1:85850200-85853200 Weak transcription NHDF-Ad bronchial
9 chr1:85850200-85853600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr1:85850200-85854400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
11 chr1:85850800-85853600 Weak transcription HUVEC blood vessel
12 chr1:85850800-85853800 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr1:85850800-85863600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr1:85851000-85853200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr1:85851000-85853200 Weak transcription Fetal Lung lung
16 chr1:85851200-85853600 Enhancers Liver Liver
17 chr1:85851400-85853800 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
18 chr1:85851600-85853400 Enhancers HepG2 liver
19 chr1:85851600-85854600 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr1:85852000-85853800 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
21 chr1:85852400-85853200 Weak transcription Fetal Intestine Large intestine
22 chr1:85852400-85863400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr1:85852400-85864200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr1:85852600-85853800 Weak transcription ES-I3 Cell Line embryonic stem cell
25 chr1:85852600-85860000 Weak transcription Gastric stomach
26 chr1:85852800-85853400 Weak transcription Osteobl bone
27 chr1:85852800-85854200 Weak transcription Pancreas Pancrea
28 chr1:85852800-85858800 Weak transcription HSMM muscle
29 chr1:85852800-85859800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015