Variant report

Variant	rs36732
Chromosome Location	chr5:94165091-94165092
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs153851	0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs153852	0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs255213	0.83[EUR][1000 genomes]
rs36725	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs36726	0.98[ASN][1000 genomes]
rs36727	0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs36728	0.85[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs36729	0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs36731	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv964907	chr5:94161637-94166013	Strong transcription Weak transcription ZNF genes & repeats Enhancers Genic enhancers	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:94130400-94192400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
2	chr5:94137600-94170400	Weak transcription	Primary hematopoietic stem cells	blood
3	chr5:94157000-94168200	Weak transcription	Thymus	Thymus
4	chr5:94160000-94168200	Weak transcription	GM12878-XiMat	blood
5	chr5:94162400-94184800	Weak transcription	Muscle Satellite Cultured Cells	--
6	chr5:94162600-94169600	Weak transcription	Gastric	stomach
7	chr5:94163000-94165400	Weak transcription	Right Ventricle	heart
8	chr5:94163400-94182600	Weak transcription	Brain Anterior Caudate	brain
9	chr5:94163600-94165600	Strong transcription	Primary hematopoietic stem cells short term culture	blood
10	chr5:94163800-94165800	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr5:94163800-94166000	Strong transcription	Primary monocytes fromperipheralblood	blood
12	chr5:94163800-94166000	Strong transcription	Primary neutrophils fromperipheralblood	blood
13	chr5:94163800-94209800	Weak transcription	Dnd41	blood
14	chr5:94164000-94165200	Strong transcription	Lung	lung
15	chr5:94164000-94165400	Strong transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
16	chr5:94164000-94165800	Strong transcription	Adipose Nuclei	Adipose
17	chr5:94164000-94169000	Strong transcription	Monocytes-CD14+_RO01746	blood
18	chr5:94164000-94185800	Weak transcription	Primary T cells from cord blood	blood
19	chr5:94164200-94165800	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
20	chr5:94164600-94165800	Strong transcription	HUVEC	blood vessel
21	chr5:94164600-94166200	Weak transcription	Spleen	Spleen
22	chr5:94164600-94168600	Weak transcription	Fetal Brain Female	brain
23	chr5:94165000-94165400	Genic enhancers	Fetal Thymus	thymus
24	chr5:94165000-94240800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood

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