Variant report

Variant	rs369526405
Chromosome Location	chr7:3135372-3135373
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:18 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv605873	chr7:2920067-3204177	Bivalent Enhancer Enhancers Genic enhancers Weak transcription Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
2	nsv1026476	chr7:2965034-3311344	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
3	nsv538656	chr7:2965034-3311344	Flanking Active TSS Enhancers Weak transcription Strong transcription Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
4	nsv464260	chr7:2966138-3315572	Enhancers Flanking Active TSS Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
5	nsv605874	chr7:2966138-3315572	Enhancers Strong transcription Weak transcription Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
6	nsv1018287	chr7:2967524-3298539	Genic enhancers Enhancers Strong transcription Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
7	nsv538657	chr7:2967524-3298539	Bivalent/Poised TSS Enhancers Strong transcription Weak transcription Bivalent Enhancer Genic enhancers Active TSS ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
8	nsv1020680	chr7:3125512-3204521	Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
9	nsv1027945	chr7:3125512-3208071	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
10	nsv1015656	chr7:3131821-3321353	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
11	nsv1023566	chr7:3134090-3159323	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
12	nsv464262	chr7:3134593-3155813	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer	Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
13	nsv605876	chr7:3134593-3155813	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
14	nsv605877	chr7:3134593-3157702	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
15	esv2588589	chr7:3134993-3139179	Flanking Active TSS Enhancers Weak transcription Active TSS	lncRNA	2 gene(s)	inside rSNPs	diseases
16	esv2074431	chr7:3135114-3138267	Enhancers Flanking Active TSS Weak transcription	lncRNA	2 gene(s)	inside rSNPs	diseases
17	esv2543840	chr7:3135134-3137801	Enhancers Weak transcription Flanking Active TSS	lncRNA	2 gene(s)	inside rSNPs	diseases
18	esv3335866	chr7:3135240-3135446	Enhancers Flanking Active TSS Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:3133800-3135400	Flanking Active TSS	Primary T helper 17 cells PMA-I stimulated	--
2	chr7:3134000-3135400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
3	chr7:3134200-3135400	Flanking Active TSS	Primary T cells from cord blood	blood
4	chr7:3134200-3135400	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
5	chr7:3134200-3135400	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
6	chr7:3134400-3135400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr7:3135000-3135400	Enhancers	Fetal Thymus	thymus
8	chr7:3135000-3136200	Enhancers	Primary T killer naive cells fromperipheralblood	blood
9	chr7:3135200-3135400	Enhancers	Primary neutrophils fromperipheralblood	blood
10	chr7:3135200-3135400	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
11	chr7:3135200-3136000	Enhancers	Primary monocytes fromperipheralblood	blood
12	chr7:3135200-3136000	Enhancers	Primary B cells from cord blood	blood
13	chr7:3135200-3136000	Enhancers	Primary B cells from peripheral blood	blood
14	chr7:3135200-3136000	Enhancers	Primary hematopoietic stem cells	blood
15	chr7:3135200-3136000	Enhancers	Primary T regulatory cells fromperipheralblood	blood
16	chr7:3135200-3136200	Enhancers	Primary T helper cells fromperipheralblood	blood
17	chr7:3135200-3136200	Enhancers	Primary T killer memory cells from peripheral blood	blood
18	chr7:3135200-3136400	Enhancers	Primary T helper naive cells fromperipheralblood	blood
19	chr7:3135200-3136400	Enhancers	Primary T helper cells PMA-I stimulated	--
20	chr7:3135200-3136400	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
21	chr7:3135200-3136600	Enhancers	Primary T helper naive cells from peripheral blood	blood
22	chr7:3135200-3136800	Enhancers	Primary T cells fromperipheralblood	blood
23	chr7:3135200-3136800	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
24	chr7:3135200-3136800	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
25	chr7:3135200-3137000	Enhancers	Primary T helper memory cells from peripheral blood 1	blood

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