Variant report

Variant rs371058709
Chromosome Location chr17:15554893-15554894
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:15551600-15555000 Active TSS Psoas Muscle Psoas
2 chr17:15551600-15555000 Flanking Active TSS Hela-S3 cervix
3 chr17:15552200-15555200 Active TSS Stomach Mucosa stomach
4 chr17:15552200-15564600 Weak transcription HepG2 liver
5 chr17:15552400-15555600 Active TSS A549 lung
6 chr17:15552400-15555600 Active TSS HSMM muscle
7 chr17:15552400-15555600 Active TSS HSMMtube muscle
8 chr17:15553000-15555000 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr17:15553000-15555000 Flanking Active TSS Adipose Nuclei Adipose
10 chr17:15553000-15555000 Flanking Active TSS HMEC breast
11 chr17:15553000-15555400 Flanking Active TSS HUVEC blood vessel
12 chr17:15553000-15555600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr17:15553000-15555600 Flanking Active TSS Fetal Adrenal Gland Adrenal Gland
14 chr17:15553000-15555600 Flanking Active TSS Osteobl bone
15 chr17:15553200-15555000 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr17:15553200-15555000 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
17 chr17:15553200-15555000 Flanking Active TSS Skeletal Muscle Female skeletal muscle
18 chr17:15553200-15555400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr17:15553200-15555400 Flanking Active TSS Fetal Lung lung
20 chr17:15553200-15555400 Flanking Active TSS Rectal Mucosa Donor 31 rectum
21 chr17:15553200-15555600 Flanking Active TSS Stomach Smooth Muscle stomach
22 chr17:15553400-15555000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr17:15553400-15555000 Active TSS Pancreatic Islets Pancreatic Islet
24 chr17:15553400-15555200 Active TSS Fetal Intestine Small intestine
25 chr17:15553400-15555200 Active TSS NHEK skin
26 chr17:15553400-15555600 Active TSS Aorta Aorta
27 chr17:15553600-15555000 Active TSS Sigmoid Colon Sigmoid Colon
28 chr17:15553600-15555200 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
29 chr17:15553600-15555400 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
30 chr17:15553600-15555400 Active TSS Duodenum Mucosa Duodenum
31 chr17:15553600-15555400 Active TSS Fetal Intestine Large intestine
32 chr17:15553600-15555600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
33 chr17:15553600-15555600 Active TSS NHDF-Ad bronchial
34 chr17:15553800-15555000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
35 chr17:15553800-15555000 Flanking Active TSS Brain Cingulate Gyrus brain
36 chr17:15553800-15555200 Flanking Active TSS Cortex derived primary cultured neurospheres brain
37 chr17:15553800-15555400 Flanking Active TSS Brain Hippocampus Middle brain
38 chr17:15554000-15555000 Flanking Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr17:15554000-15555000 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
40 chr17:15554000-15555000 Flanking Active TSS Brain Angular Gyrus brain
41 chr17:15554000-15555000 Active TSS Fetal Brain Female brain
42 chr17:15554000-15555000 Flanking Active TSS Fetal Muscle Trunk muscle
43 chr17:15554000-15555000 Flanking Active TSS Fetal Muscle Leg muscle
44 chr17:15554000-15555000 Flanking Active TSS Lung lung
45 chr17:15554000-15555200 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr17:15554000-15555200 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
47 chr17:15554000-15555200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr17:15554000-15555200 Flanking Active TSS Brain Inferior Temporal Lobe brain
49 chr17:15554000-15555200 Flanking Active TSS Pancreas Pancrea
50 chr17:15554000-15555200 Flanking Active TSS Skeletal Muscle Male skeletal muscle

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